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L2_059_382G1_scaffold_185

Search features with annotation key words

Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_185_1
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

23..892
DNA (870bp) protein (290aa)
MscS Mechanosensitive ion channel n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TJ28_9FIRM
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:CDC73408.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
small-conductance mechanosensitive channel
L2_059_382G1_scaffold_185_2
Methanococcus maripaludis, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(1017..1877)
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Methanococcus maripaludis X1 RepID=G0GZS9_METMI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK19810.1}; TaxID=1053692 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus maripaludis X1.;"
L2_059_382G1_scaffold_185_3
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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2134..3495
DNA (1362bp) protein (454aa)
Putative efflux protein MATE family n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6XY40_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDD28668.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
putative efflux protein, MATE family
L2_059_382G1_scaffold_185_4
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3574..4782)
DNA (1209bp) protein (403aa)
Transporter, major facilitator family protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6L956_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:EET62795.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Major Facilitator Superfamily.
L2_059_382G1_scaffold_185_5
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4901..5803
DNA (903bp) protein (301aa)
Transcriptional regulator AraC family n=1 Tax=Coprococcus comes CAG:19 RepID=R6LVE2_9FIRM
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDB86096.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
transcriptional regulator, AraC family
L2_059_382G1_scaffold_185_6
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(5846..6166)
DNA (321bp) protein (107aa)
Helix-turn-helix family protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TV41_9FIRM
Helix-turn-helix family protein {ECO:0000313|EMBL:CDC77333.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
transcriptional regulator
L2_059_382G1_scaffold_185_7
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6581..7240)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LYG5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS63593.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
acetyltransferase
L2_059_382G1_scaffold_185_8
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(7378..7614)
DNA (237bp) protein (79aa)
DNA-binding helix-turn-helix protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B294_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCX45531.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
XRE family transcriptional regulator
L2_059_382G1_scaffold_185_9
unknown

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7733..8023
DNA (291bp) protein (97aa)

This feature has no annotations

L2_059_382G1_scaffold_185_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8078..8743)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XMV7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY96976.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
short-chain dehydrogenase/reductase SDR
L2_059_382G1_scaffold_185_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8760..9452)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XB78_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY96977.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
short-chain dehydrogenase
L2_059_382G1_scaffold_185_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9458..10117)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XLW0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY96978.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L2_059_382G1_scaffold_185_13
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10324..10854)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ABF7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX36721.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
beta-xylosidase
L2_059_382G1_scaffold_185_14
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11237..13663
DNA (2427bp) protein (809aa)
E1-E2 ATPase n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A6S0_9CLOT
E1-E2 ATPase {ECO:0000313|EMBL:CCX36722.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
cation-transporting ATPase
L2_059_382G1_scaffold_185_15
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14003..14530)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BXH4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG75281.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
flavodoxin
L2_059_382G1_scaffold_185_16
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14702..15364)
DNA (663bp) protein (221aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W2H1_9CLOT
L2_059_382G1_scaffold_185_17
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15436..16389)
DNA (954bp) protein (318aa)
competence protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036C2176
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDA77822.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
ComEC2; metallo-beta-lactamase fold hydrolase
L2_059_382G1_scaffold_185_18
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(16467..16724)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y8Y5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD27754.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
hypothetical protein
L2_059_382G1_scaffold_185_19
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(17038..17502)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F342_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03834.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L2_059_382G1_scaffold_185_20
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

17696..19219
DNA (1524bp) protein (508aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y674_9FIRM
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I {ECO:0000313|EMBL:CDD31438.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
Phosphomannomutase
L2_059_382G1_scaffold_185_21
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19630..21804)
DNA (2175bp) protein (725aa)
Putative ferrous iron transport protein B n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KY63_OSCVS
putative ferrous iron transport protein B
Putative ferrous iron transport protein B {ECO:0000313|EMBL:BAL01067.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L2_059_382G1_scaffold_185_22
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21906..22427)
DNA (522bp) protein (174aa)
Ribosomal subunit interface protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5ACV1_9CLOT
Ribosomal subunit interface protein {ECO:0000313|EMBL:CCX37231.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
ribosomal subunit interface protein
L2_059_382G1_scaffold_185_23
Treponema brennaborense, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(22629..23003)
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LMS1_TREBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE17811.1}; TaxID=906968 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3).;"
L2_059_382G1_scaffold_185_24
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23134..23634)
DNA (501bp) protein (167aa)
S1 RNA binding domain protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A2Y8_9CLOT
S1 RNA binding domain protein {ECO:0000313|EMBL:CCX37233.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Predicted RNA binding protein (contains ribosomal protein S1 domain)
L2_059_382G1_scaffold_185_25
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(23669..23974)
DNA (306bp) protein (102aa)
Septum formation initiator n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YF61_9FIRM
Septum formation initiator {ECO:0000313|EMBL:CDD27236.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
Septum formation initiator.
L2_059_382G1_scaffold_185_26
unknown

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comp(24057..24503)
DNA (447bp) protein (149aa)

This feature has no annotations

L2_059_382G1_scaffold_185_27
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

Not on your lists

comp(24500..24775)
DNA (276bp) protein (92aa)
Sporulation protein YabP n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y7G2_9FIRM
Sporulation protein YabP {ECO:0000313|EMBL:CDD27239.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
sporulation protein YabP
L2_059_382G1_scaffold_185_28
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24916..25293)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KDZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37113.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
cytidine/deoxycytidylate deaminase family protein
L2_059_382G1_scaffold_185_29
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25317..25565)
DNA (249bp) protein (83aa)
S4 domain protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6RQU9_9CLOT
S4 domain protein {ECO:0000313|EMBL:CDC36832.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
L2_059_382G1_scaffold_185_30
Mitsuokella multacida, Mitsuokella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(25665..25940)
DNA (276bp) protein (92aa)
DNA-binding protein HU n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KMW2_9FIRM
DNA-binding protein HU {ECO:0000313|EMBL:EEX68701.1}; TaxID=500635 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Mitsuokella.;" source="Mitsuokella multacida DSM 20544.;"
bacterial nucleoid DNA-binding protein
Displaying items 1-30 of 68 in total

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