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L2_059_382G1_scaffold_220

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_220_1
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3..764
DNA (762bp) protein (254aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DV91_9BACT
L2_059_382G1_scaffold_220_2
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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772..2082
DNA (1311bp) protein (437aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutamic acid-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000256|HAMAP-Rule:MF_00639}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DUU6_9BACT
UDP-N-acetylmuramoylalanine--D-glutamate ligase
L2_059_382G1_scaffold_220_3
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2060..2917
DNA (858bp) protein (286aa)
Peptidoglycan-binding LysM n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DW51_9BACT
Peptidoglycan-binding LysM {ECO:0000313|EMBL:CDD94366.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
Peptidoglycan-binding LysM
L2_059_382G1_scaffold_220_4
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2945..4087
DNA (1143bp) protein (381aa)
Cell cycle protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DYJ5_9BACT
Cell cycle protein {ECO:0000313|EMBL:CDD94367.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
cell cycle protein
L2_059_382G1_scaffold_220_5
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4084..5208
DNA (1125bp) protein (375aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DUV1_9BACT
L2_059_382G1_scaffold_220_6
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5201..7498
DNA (2298bp) protein (766aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|SAAS:SAAS00041869}; EC=1.-.-.- {ECO:0000256|SAAS:SAAS00274693};; EC=1.3.1.98 {ECO:0000256|SAAS:SAAS00057125};; EC=6.3.2.8 {ECO:0000256|SAAS:SAAS00243344};; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
UDP-N-acetylmuramate/alanine ligase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DV99_9BACT
UDP-N-acetylmuramate--L-alanine ligase
L2_059_382G1_scaffold_220_7
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7520..8455
DNA (936bp) protein (312aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DW55_9BACT
L2_059_382G1_scaffold_220_8
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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8554..9453
DNA (900bp) protein (300aa)
Polypeptide-transport-associated domain protein FtsQ-type n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DYK0_9BACT
polypeptide-transport-associated domain-containing protein FtsQ-type
Polypeptide-transport-associated domain protein FtsQ-type {ECO:0000313|EMBL:ACD04499.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L2_059_382G1_scaffold_220_9
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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9586..10626
DNA (1041bp) protein (347aa)
recA protein (EC:3.6.3.8)
Protein RecA n=2 Tax=Akkermansia muciniphila RepID=B2UPW5_AKKM8
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=239935 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila.;"
L2_059_382G1_scaffold_220_10
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

11038..12024
DNA (987bp) protein (329aa)
Cell wall hydrolase/autolysin n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DUV5_9BACT
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:CDD94374.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
cell wall hydrolase/autolysin
L2_059_382G1_scaffold_220_11
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

12053..12682
DNA (630bp) protein (210aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
Octanoyltransferase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DVA4_9BACT
lipoate-protein ligase B
L2_059_382G1_scaffold_220_12
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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12807..15377
DNA (2571bp) protein (857aa)
Two component regulator propeller domain protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E0S0_9BACT
Two component regulator propeller domain protein {ECO:0000313|EMBL:CDD96285.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
two component regulator propeller domain-containing protein
L2_059_382G1_scaffold_220_13
unknown

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15374..16984
DNA (1611bp) protein (537aa)

This feature has no annotations

L2_059_382G1_scaffold_220_14
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

16993..18606
DNA (1614bp) protein (538aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E1Z6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD96283.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L2_059_382G1_scaffold_220_15
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

18783..20195
DNA (1413bp) protein (471aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DW58_9BACT
L2_059_382G1_scaffold_220_16
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

20215..20823
DNA (609bp) protein (203aa)
3-isopropylmalate dehydratase small subunit n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DYK5_9BACT
3-isopropylmalate dehydratase small subunit {ECO:0000313|EMBL:CDD94377.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
leuD; isopropylmalate isomerase small subunit
L2_059_382G1_scaffold_220_17
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

20856..21977
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DWH3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD94378.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L2_059_382G1_scaffold_220_18
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

22015..23586
DNA (1572bp) protein (524aa)
2-alkenal reductase (EC:1.3.1.74)
2-alkenal reductase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DUW0_9BACT
2-alkenal reductase {ECO:0000313|EMBL:CDD94379.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L2_059_382G1_scaffold_220_19
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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23594..25183
DNA (1590bp) protein (530aa)
Trypsin-like protein serine protease typically periplasmic contain C-terminal PDZ domain-like protein n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6K282_9BACT
Trypsin-like protein serine protease typically periplasmic contain C-terminal PDZ domain-like protein {ECO:0000313|EMBL:CDB56407.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
Trypsin-like protein serine protease
L2_059_382G1_scaffold_220_20
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

25229..26386
DNA (1158bp) protein (386aa)
aroB; 3-dehydroquinate synthase (EC:4.2.3.4)
3-dehydroquinate synthase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E5Q6_9BACT
3-dehydroquinate synthase {ECO:0000313|EMBL:CDD96877.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L2_059_382G1_scaffold_220_21
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(26403..27617)
DNA (1215bp) protein (405aa)
amaA; amidohydrolase family protein (EC:3.5.1.14)
Crowt peptidase m20d n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E3N2_9BACT
Crowt peptidase m20d {ECO:0000313|EMBL:CDD96878.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L2_059_382G1_scaffold_220_22
unknown

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28222..28572
DNA (351bp) protein (117aa)

This feature has no annotations

L2_059_382G1_scaffold_220_23
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(28619..29404)
DNA (786bp) protein (262aa)
ABC transporter related n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E4B2_9BACT
ABC transporter related {ECO:0000313|EMBL:CDD96372.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
ABC transporter
L2_059_382G1_scaffold_220_24
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(29523..29963)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E269_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD96373.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L2_059_382G1_scaffold_220_25
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(30355..31227)
DNA (873bp) protein (291aa)
Elongation factor Ts n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E0E7_9BACT
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
translation elongation factor Ts
L2_059_382G1_scaffold_220_26
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists


comp(31259..32035)
DNA (777bp) protein (259aa)
30S ribosomal protein S2 n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E0Z6_9BACT
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
30S ribosomal protein S2
L2_059_382G1_scaffold_220_27
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

32258..33664
DNA (1407bp) protein (469aa)
MATE efflux family protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E213_9BACT
MATE efflux family protein {ECO:0000313|EMBL:CDD96376.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
putative efflux protein, MATE family
L2_059_382G1_scaffold_220_28
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33685..34356)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XS61_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY98461.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L2_059_382G1_scaffold_220_29
Akkermansia muciniphila, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(34347..35600)
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila (strain ATCC BAA-835) RepID=B2UPX7_AKKM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD04512.1}; TaxID=349741 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia.;" source="Akkermansia muciniphila (strain ATCC BAA-835 / Muc).;"
L2_059_382G1_scaffold_220_30
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

35769..36755
DNA (987bp) protein (329aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|SAAS:SAAS00078538};; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E275_9BACT
2-dehydro-3-deoxyphosphooctonate aldolase
Displaying items 1-30 of 53 in total

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