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L2_059_382G1_scaffold_223

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_223_1
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..159)
DNA (159bp) protein (53aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. D5 RepID=F0YVE1_9CLOT
Putative uncharacterized protein {ECO:0000313|EMBL:EGB94861.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L2_059_382G1_scaffold_223_2
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(356..1693)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5BXE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX60320.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
MATE efflux family protein
L2_059_382G1_scaffold_223_3
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1772..2347)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5C172_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX60319.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
Transcriptional regulator
L2_059_382G1_scaffold_223_4
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2416..4191)
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BRA8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX55287.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
hypothetical protein
L2_059_382G1_scaffold_223_5
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4311..5552)
DNA (1242bp) protein (414aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KW08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33388.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
major facilitator superfamily transporter
L2_059_382G1_scaffold_223_6
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5553..6260)
DNA (708bp) protein (236aa)
Uncharacterized protein n=2 Tax=Blautia RepID=R5BVM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33484.2}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC transporter
L2_059_382G1_scaffold_223_7
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6260..6964)
DNA (705bp) protein (235aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CKD0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX59649.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
polyamine-transporting ATPase
L2_059_382G1_scaffold_223_8
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7045..7701)
DNA (657bp) protein (219aa)
Transcriptional regulator, TetR family n=2 Tax=Clostridiales RepID=B0NHU9_CLOSV
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDS05697.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
putative TetR family transcriptional regulator
L2_059_382G1_scaffold_223_9
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7945..8325)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2A2I5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ20693.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L2_059_382G1_scaffold_223_10
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8319..8891)
DNA (573bp) protein (191aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
3-octaprenyl-4-hydroxybenzoate carboxy-lyase (Polyprenylp-hydroxybenzoate decarboxylase) n=1 Tax=Clostridium sp. D5 RepID=F0Z552_9CLOT
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
L2_059_382G1_scaffold_223_11
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8919..10397)
DNA (1479bp) protein (493aa)
Putative phenylphosphate carboxylase, alpha subunit n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C545_9CLOT
Putative phenylphosphate carboxylase, alpha subunit {ECO:0000313|EMBL:EEG72813.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
putative decarboxylase
L2_059_382G1_scaffold_223_12
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10530..12134)
DNA (1605bp) protein (535aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;"
Acetate CoA-transferase YdiF n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TWN6_ALKMQ
coenzyme A transferase
L2_059_382G1_scaffold_223_13
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12161..13075)
DNA (915bp) protein (305aa)
Transcriptional regulator n=2 Tax=Clostridium RepID=D8GUT4_CLOLD
transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGY76001.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10061.;"
L2_059_382G1_scaffold_223_14
Desulfotomaculum ruminis, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13238..13999)
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DKI0_DESRL
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEG59240.1}; Flags: Precursor;; TaxID=696281 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 /; DL).;"
L2_059_382G1_scaffold_223_15
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14038..15978)
DNA (1941bp) protein (647aa)
2,4-dienoyl-CoA reductase (EC:1.3.1.34)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AYT0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ31315.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
L2_059_382G1_scaffold_223_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15995..17248)
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Desulfitobacterium hafniense RepID=UPI000377CC21
major facilitator superfamily protein
Major Facilitator Superfamily protein {ECO:0000313|EMBL:EQI16677.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L2_059_382G1_scaffold_223_17
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17268..19211)
DNA (1944bp) protein (648aa)
2,4-dienoyl-CoA reductase (NADPH) (EC:1.3.1.34)
2,4-dienoyl-CoA reductase (NADPH) {ECO:0000313|EMBL:CCP26755.1}; EC=1.3.1.34 {ECO:0000313|EMBL:CCP26755.1};; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;" source="Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1).;"
2,4-dienoyl-CoA reductase (NADPH) n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LXK0_TEPAE
L2_059_382G1_scaffold_223_18
Thermovirga lienii, Thermovirga, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(19240..20304)
DNA (1065bp) protein (355aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V601_THELD
alcohol dehydrogenase
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:AER65906.1}; TaxID=580340 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirga.;" source="Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314).;"
L2_059_382G1_scaffold_223_19
Enterococcus raffinosus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20388..21143)
DNA (756bp) protein (252aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
Uncharacterized protein n=1 Tax=Enterococcus raffinosus ATCC 49464 RepID=R2PE30_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOH82612.1}; TaxID=1158602 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus raffinosus ATCC 49464.;"
L2_059_382G1_scaffold_223_20
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21439..22674
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris ATCC 29176 RepID=B5CNT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDY33058.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
putative PucR family transcriptional regulator
L2_059_382G1_scaffold_223_21
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22665..23219)
DNA (555bp) protein (185aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NHV1_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS05699.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_059_382G1_scaffold_223_22
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23306..23566)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KW11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN33391.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_059_382G1_scaffold_223_23
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23596..24873)
DNA (1278bp) protein (426aa)
2-hydroxyglutaryl-CoA dehydratase, D-component n=2 Tax=Clostridiales RepID=B0NHV3_CLOSV
2-hydroxyglutaryl-CoA dehydratase, D-component {ECO:0000313|EMBL:EDS05701.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_059_382G1_scaffold_223_24
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25027..26172)
DNA (1146bp) protein (382aa)
Cysteine desulfurase family protein n=2 Tax=Clostridiales RepID=B0NHV4_CLOSV
Cysteine desulfurase {ECO:0000313|EMBL:EGN33393.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_059_382G1_scaffold_223_25
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26334..26924)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NHW3_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS05711.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
TetR family transcriptional regulator
L2_059_382G1_scaffold_223_26
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27088..28128
DNA (1041bp) protein (347aa)
dihydrodipicolinate reductase (EC:1.3.1.26)
hypothetical protein n=1 Tax=Erysipelothrix tonsillarum RepID=UPI00037D67B9
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
L2_059_382G1_scaffold_223_27
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28211..29032)
DNA (822bp) protein (274aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IIP8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58683.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
nitroreductase
L2_059_382G1_scaffold_223_28
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29209..30072
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N6Z1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS75792.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
MerR family transcriptional regulator
L2_059_382G1_scaffold_223_29
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

comp(30092..30577)
DNA (486bp) protein (162aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Formamidopyrimidine-DNA glycosylase n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BF53_9FIRM
formamidopyrimidine-DNA glycosylase
L2_059_382G1_scaffold_223_30
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30862..31161)
DNA (300bp) protein (100aa)
Toxin-antitoxin system, toxin component, RelE family n=1 Tax=Clostridium sp. D5 RepID=F0YZK5_9CLOT
Toxin-antitoxin system, toxin component, RelE family {ECO:0000313|EMBL:EGB92860.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Plasmid stabilization system protein
Displaying items 1-30 of 60 in total

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