ggKbase home page

L2_059_382G1_scaffold_308

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_308_1
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

50..316
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MCE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68321.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
putative transmembrane protein
L2_059_382G1_scaffold_308_2
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

332..622
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036FB8AA
Uncharacterized protein {ECO:0000313|EMBL:CCY28453.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L2_059_382G1_scaffold_308_3
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(612..809)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K850_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN41504.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
PIN domain.
L2_059_382G1_scaffold_308_4
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(806..1021)
DNA (216bp) protein (72aa)
Prevent-host-death family protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K851_9FIRM
Prevent-host-death family protein {ECO:0000313|EMBL:EGN41505.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
prevent-host-death family protein
L2_059_382G1_scaffold_308_5
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1142..2506)
DNA (1365bp) protein (455aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D8R7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG52277.1}; Flags: Fragment;; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L2_059_382G1_scaffold_308_6
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2644..4062)
DNA (1419bp) protein (473aa)
Putative sensor histidine kinase TcrY {ECO:0000313|EMBL:KJJ69090.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJJ69090.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HKM9_9CLOT
sensor histidine kinase
L2_059_382G1_scaffold_308_7
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4091..4762)
DNA (672bp) protein (224aa)
Response regulator receiver domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D8R4_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEG52284.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_059_382G1_scaffold_308_8
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4980..7871
DNA (2892bp) protein (964aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IIZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58509.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L2_059_382G1_scaffold_308_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7941..8543
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IIZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58510.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L2_059_382G1_scaffold_308_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8540..11029
DNA (2490bp) protein (830aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IIZ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58511.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L2_059_382G1_scaffold_308_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10998..12308)
DNA (1311bp) protein (437aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IIZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58512.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L2_059_382G1_scaffold_308_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12305..13021)
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IIZ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58513.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Response regulator of the LytR/AlgR family
L2_059_382G1_scaffold_308_13
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13094..13237
DNA (144bp) protein (48aa)
GntR family transcriptional regulator n=4 Tax=Clostridium RepID=E7GJD4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07433.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
GntR family transcriptional regulator
L2_059_382G1_scaffold_308_14
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13240..14100
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F800_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07432.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ABC-type multidrug transport system, ATPase component
L2_059_382G1_scaffold_308_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14097..14741
DNA (645bp) protein (215aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SNU8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07431.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L2_059_382G1_scaffold_308_16
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14744..15427)
DNA (684bp) protein (228aa)
Multidrug ABC transporter ATPase and permease n=1 Tax=Clostridium termitidis CT1112 RepID=S0FFV5_9CLOT
Multidrug ABC transporter ATPase and permease {ECO:0000313|EMBL:EMS69597.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
ABC transporter ATP-binding protein
L2_059_382G1_scaffold_308_17
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15496..16143)
DNA (648bp) protein (216aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Roseburia sp. CAG:182 RepID=R7QYX5_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDF42883.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
ABC transporter ATP-binding protein
L2_059_382G1_scaffold_308_18
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16450..17043
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WR05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX74626.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L2_059_382G1_scaffold_308_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17040..17885
DNA (846bp) protein (282aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6W4_9FIRM
Domain of unknown function (DUF1814).
Uncharacterized protein {ECO:0000313|EMBL:CBL00577.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L2_059_382G1_scaffold_308_20
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17976..18593
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2AS02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ32052.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
Transcriptional regulator
L2_059_382G1_scaffold_308_21
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18693..18983
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2B037_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ32053.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
ABC-type multidrug transport system, ATPase and permease components
L2_059_382G1_scaffold_308_22
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19032..20216
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2B037_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ32053.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
ABC-type multidrug transport system, ATPase and permease components
L2_059_382G1_scaffold_308_23
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20213..21037
DNA (825bp) protein (275aa)
ABC transporter, ATP-binding protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LGU1_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EET60291.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
ABC-type multidrug transport system, ATPase and permease components
L2_059_382G1_scaffold_308_24
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20976..21893
DNA (918bp) protein (306aa)
Uncharacterized protein (Fragment) n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2ATT6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ31511.1}; Flags: Fragment;; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
ABC-type multidrug transport system, ATPase and permease components
L2_059_382G1_scaffold_308_25
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22086..22517
DNA (432bp) protein (144aa)
Transcriptional regulator, Fur family n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AI49_9CLOT
Transcriptional regulator, Fur family {ECO:0000313|EMBL:EFC98510.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
ferric uptake regulator family protein
L2_059_382G1_scaffold_308_26
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22514..22825
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JNR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64428.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
hypothetical protein
L2_059_382G1_scaffold_308_27
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22926..23924
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6JZZ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64429.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
periplasmic solute binding protein
L2_059_382G1_scaffold_308_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23946..24653
DNA (708bp) protein (236aa)
Zinc ABC transporter ATP-binding protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9YZ45_9CLOT
Zinc ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ13037.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
ABC transporter
L2_059_382G1_scaffold_308_29
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24640..25458
DNA (819bp) protein (273aa)
Uncharacterized protein n=11 Tax=Clostridium RepID=A8RNF9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF24562.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
ABC transporter
L2_059_382G1_scaffold_308_30
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25451..26425
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KQQ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64432.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
cobalamin synthesis protein P47K
Displaying items 1-30 of 53 in total

View Taxonomy