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L2_059_382G1_scaffold_373

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_373_1
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..121
DNA (120bp) protein (40aa)
Transketolase n=2 Tax=Alistipes RepID=R5V6W9_9BACT
transketolase
Transketolase {ECO:0000313|EMBL:AFL76805.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_059_382G1_scaffold_373_2
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

310..822
DNA (513bp) protein (171aa)
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Alistipes RepID=I3YIH8_ALIFI
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor sigma-70 family {ECO:0000313|EMBL:CCZ76436.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_382G1_scaffold_373_3
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

834..1406
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UEJ8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ76435.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L2_059_382G1_scaffold_373_4
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1822..2382
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YIH6_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ76434.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_382G1_scaffold_373_5
unknown

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comp(2436..3047)
DNA (612bp) protein (204aa)

This feature has no annotations

L2_059_382G1_scaffold_373_6
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3274..4578
DNA (1305bp) protein (435aa)
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
S-adenosylmethionine synthase n=2 Tax=Alistipes RepID=I3YIH4_ALIFI
L2_059_382G1_scaffold_373_7
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4754..6226
DNA (1473bp) protein (491aa)
Peptidase Do {ECO:0000313|EMBL:EFR58961.1}; EC=3.4.21.- {ECO:0000313|EMBL:EFR58961.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Peptidase Do n=1 Tax=Alistipes sp. HGB5 RepID=E4M7X6_9BACT
periplasmic serine protease, Do/DeqQ family
L2_059_382G1_scaffold_373_8
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6281..7141
DNA (861bp) protein (287aa)
RNA polymerase sigma factor, sigma-70 family n=3 Tax=Alistipes RepID=I3YIH2_ALIFI
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AFL76790.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_059_382G1_scaffold_373_9
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7308..7811)
DNA (504bp) protein (168aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
1,4-dihydroxy-2-naphthoate prenyltransferase (EC:2.5.1.74)
1 4-dihydroxy-2-naphthoate prenyltransferase n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UL40_9BACT
L2_059_382G1_scaffold_373_10
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8154..8816)
DNA (663bp) protein (221aa)
uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Uracil-DNA glycosylase n=2 Tax=Alistipes RepID=I3YIH0_ALIFI
L2_059_382G1_scaffold_373_11
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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9653..10864
DNA (1212bp) protein (404aa)
Fibrobacter succinogene major paralogous domain protein n=1 Tax=Alistipes sp. HGB5 RepID=E4M7Y0_9BACT
Fibrobacter succinogene major paralogous domain protein {ECO:0000313|EMBL:EFR58954.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L2_059_382G1_scaffold_373_12
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11237..13411)
DNA (2175bp) protein (725aa)
TonB-dependent receptor n=1 Tax=Alistipes sp. HGB5 RepID=E4M7Y1_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:EFR58964.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
TonB family protein
L2_059_382G1_scaffold_373_13
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13447..13821)
DNA (375bp) protein (125aa)
Transcriptional regulator, BlaI/MecI/CopY family n=1 Tax=Alistipes sp. HGB5 RepID=E4M7Y2_9BACT
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EFR58951.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
transcriptional regulator
L2_059_382G1_scaffold_373_14
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13993..14742)
DNA (750bp) protein (250aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
S-adenosylmethionine-dependent methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Alistipes sp. HGB5 RepID=E4M7Y3_9BACT
L2_059_382G1_scaffold_373_15
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14748..15260)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YIG4_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76782.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_059_382G1_scaffold_373_16
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15503..17137)
DNA (1635bp) protein (545aa)
PSP1 C-terminal domain protein n=1 Tax=Alistipes sp. HGB5 RepID=E4M7Y6_9BACT
PSP1 C-terminal domain protein {ECO:0000313|EMBL:EFR58963.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
PSP1-like protein
L2_059_382G1_scaffold_373_17
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17189..18550)
DNA (1362bp) protein (454aa)
MATE efflux family protein n=1 Tax=Alistipes sp. HGB5 RepID=E4M7Y7_9BACT
MATE efflux family protein {ECO:0000313|EMBL:EFR58967.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
efflux protein, MATE family
L2_059_382G1_scaffold_373_18
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18654..19958)
DNA (1305bp) protein (435aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Signal transduction histidine kinase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YIG1_ALIFI
signal transduction histidine kinase
L2_059_382G1_scaffold_373_19
unknown

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20239..20598
DNA (360bp) protein (120aa)

This feature has no annotations

L2_059_382G1_scaffold_373_20
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20863..23316)
DNA (2454bp) protein (818aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Alistipes sp. HGB5 RepID=E4ME70_9BACT
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:EFR56771.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
chaperone ATPase
L2_059_382G1_scaffold_373_21
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23392..23493
DNA (102bp) protein (34aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YIF9_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ76417.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_382G1_scaffold_373_22
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23502..24731)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=I3YIF8_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ76416.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
L2_059_382G1_scaffold_373_23
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25002..25541
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UEH2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ76415.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L2_059_382G1_scaffold_373_24
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25635..26129)
DNA (495bp) protein (165aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Phosphoesterase, MJ0936 family n=3 Tax=Alistipes RepID=I3YIF6_ALIFI
phosphoesterase
L2_059_382G1_scaffold_373_25
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26130..27404)
DNA (1275bp) protein (425aa)
AAA ATPase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YIF5_ALIFI
AAA ATPase
AAA ATPase {ECO:0000313|EMBL:AFL76773.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_059_382G1_scaffold_373_26
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(27544..29301)
DNA (1758bp) protein (586aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EFR56825.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EFR56825.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Aspartate--tRNA ligase n=1 Tax=Alistipes sp. HGB5 RepID=E4ME65_9BACT
aspartyl-tRNA synthetase
L2_059_382G1_scaffold_373_27
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29480..29896
DNA (417bp) protein (139aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Alistipes sp. HGB5 RepID=E4ME64_9BACT
cytosine/adenosine deaminase
L2_059_382G1_scaffold_373_28
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29990..30949
DNA (960bp) protein (320aa)
Tetratricopeptide repeat protein n=1 Tax=Alistipes sp. HGB5 RepID=E4ME63_9BACT
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EFR56776.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L2_059_382G1_scaffold_373_29
unknown

Not on your lists

30962..31123
DNA (162bp) protein (54aa)

This feature has no annotations

L2_059_382G1_scaffold_373_30
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31252..32160)
DNA (909bp) protein (303aa)
Putative iron-sulfur cluster-binding protein n=1 Tax=Alistipes sp. HGB5 RepID=E4ME62_9BACT
Putative iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EFR56804.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
Displaying items 1-30 of 45 in total

View Taxonomy