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L2_059_382G1_scaffold_393

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_393_1
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1080)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NU58_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC14765.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
aminoglycoside phosphotransferase
L2_059_382G1_scaffold_393_2
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1243..2742
DNA (1500bp) protein (500aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
UvrD/REP helicase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSH4_9BIFI
DNA helicase II
L2_059_382G1_scaffold_393_3
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2765..4342)
DNA (1578bp) protein (526aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6NRF8_9BIFI
Putative hydrolase {ECO:0000313|EMBL:EEG71123.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR04019.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hydrolase
L2_059_382G1_scaffold_393_4
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4418..5302
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PYF9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR04018.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Lon protease
L2_059_382G1_scaffold_393_5
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5389..5814
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSH1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71121.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_059_382G1_scaffold_393_6
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6319..7884
DNA (1566bp) protein (522aa)
DivIVA domain repeat protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSG9_9BIFI
DivIVA domain repeat protein {ECO:0000313|EMBL:EEG71119.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR04016.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
dihydrouridine synthase
L2_059_382G1_scaffold_393_7
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7976..9154
DNA (1179bp) protein (393aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=2 Tax=Bifidobacterium RepID=C0BSG8_9BIFI
1-deoxy-D-xylulose 5-phosphate reductoisomerase
L2_059_382G1_scaffold_393_8
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9242..10438
DNA (1197bp) protein (399aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=2 Tax=Bifidobacterium RepID=C0BSG7_9BIFI
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
L2_059_382G1_scaffold_393_9
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10532..12244
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSG6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEG71116.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
esterase
L2_059_382G1_scaffold_393_10
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12335..13063
DNA (729bp) protein (243aa)
DNA repair protein RecO n=2 Tax=Bifidobacterium RepID=C0BSG5_9BIFI
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
DNA recombination protein RecO
L2_059_382G1_scaffold_393_11
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13069..13860
DNA (792bp) protein (264aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
UDP pyrophosphate synthase (EC:2.5.1.31)
Isoprenyl transferase n=2 Tax=Bifidobacterium RepID=C0BSG4_9BIFI
L2_059_382G1_scaffold_393_12
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13922..15199)
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6PBY3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16011.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
nucleoside hydrolase
L2_059_382G1_scaffold_393_13
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15389..16489)
DNA (1101bp) protein (367aa)
NMT1/THI5-like protein n=2 Tax=Bifidobacterium RepID=C0BSG2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16009.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
ABC transporter substrate-binding protein
L2_059_382G1_scaffold_393_14
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16776..17627)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q248_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16007.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
ABC transporter permease
L2_059_382G1_scaffold_393_15
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17925..19481)
DNA (1557bp) protein (519aa)
Glycosyl hydrolase family 32 n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSG0_9BIFI
Beta-fructofuranosidase {ECO:0000313|EMBL:BAR04007.1}; Glycosyl hydrolase family 32 {ECO:0000313|EMBL:EEG71110.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
beta-(1-2)-fructofuranosidase
L2_059_382G1_scaffold_393_16
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19628..20953)
DNA (1326bp) protein (442aa)
Sucrose transport protein n=2 Tax=Bifidobacterium RepID=R6NV58_9BIFI
Galactoside transport protein {ECO:0000313|EMBL:BAR04006.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
galactoside permease
L2_059_382G1_scaffold_393_17
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21240..22274)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6Q237_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16002.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
LacI family transcriptional regulator
L2_059_382G1_scaffold_393_18
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22384..22749)
DNA (366bp) protein (122aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=B6XUJ9_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEG71106.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L2_059_382G1_scaffold_393_19
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22817..23659)
DNA (843bp) protein (281aa)
Phosphomethylpyrimidine kinase n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSF5_9BIFI
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:KEF28109.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
phosphomethylpyrimidine kinase
L2_059_382G1_scaffold_393_20
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23728..24480)
DNA (753bp) protein (251aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Thiamine-phosphate synthase n=2 Tax=Bifidobacterium RepID=R6Q227_9BIFI
bifunctional protein thiEC
L2_059_382G1_scaffold_393_21
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24610..25479)
DNA (870bp) protein (290aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Hydroxyethylthiazole kinase n=2 Tax=Bifidobacterium RepID=C0BSF3_9BIFI
hydroxyethylthiazole kinase
L2_059_382G1_scaffold_393_22
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25669..27483)
DNA (1815bp) protein (605aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=C0BSF2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15994.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L2_059_382G1_scaffold_393_23
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27519..29459)
DNA (1941bp) protein (647aa)
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NV11_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15993.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Twitching motility protein PilT
L2_059_382G1_scaffold_393_24
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29506..31263)
DNA (1758bp) protein (586aa)
Type II/IV secretion system protein n=2 Tax=Bifidobacterium RepID=C0BSF0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15991.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Type IV fimbrial assembly2C ATPase PilB
L2_059_382G1_scaffold_393_25
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31600..32001
DNA (402bp) protein (134aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6P5M6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR03997.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L2_059_382G1_scaffold_393_26
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31970..32386
DNA (417bp) protein (139aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6P5M6_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15989.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
L2_059_382G1_scaffold_393_27
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32399..33061
DNA (663bp) protein (221aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6Q1Z8_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15987.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
prepilin-type cleavage/methylation-like protein
L2_059_382G1_scaffold_393_28
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33578..34021
DNA (444bp) protein (148aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=2 Tax=Bifidobacterium RepID=C0BSE6_9BIFI
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:KFI97602.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
type IV pilin PilA
L2_059_382G1_scaffold_393_29
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34066..35415
DNA (1350bp) protein (450aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6NUZ5_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15983.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
Type IV fimbrial assembly protein PilC
L2_059_382G1_scaffold_393_30
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35437..37812
DNA (2376bp) protein (792aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6Q1Z3_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC15982.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
hypothetical protein
Displaying items 1-30 of 38 in total

View Taxonomy