ggKbase home page

L2_059_382G1_scaffold_521

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_521_1
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..958
DNA (957bp) protein (319aa)
Tex-like protein N-terminal domain protein n=5 Tax=Bacteroides RepID=C6Z917_9BACE
RNA-binding protein
Competence protein ComEA helix-hairpin-helix repeat region {ECO:0000313|EMBL:EOS04889.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_059_382G1_scaffold_521_2
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

981..1778
DNA (798bp) protein (266aa)
NADH pyrophosphatase n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L4C8_BACV8
NADH pyrophosphatase
NADH pyrophosphatase {ECO:0000313|EMBL:ABR40542.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L2_059_382G1_scaffold_521_3
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1855..3516
DNA (1662bp) protein (554aa)
TrkA C-terminal domain protein n=5 Tax=Bacteroides RepID=C6Z919_9BACE
Membrane protein {ECO:0000313|EMBL:EFV68567.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L2_059_382G1_scaffold_521_4
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3526..5526
DNA (2001bp) protein (667aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Fructose-1,6-bisphosphatase class 3 n=4 Tax=Bacteroides RepID=C6Z920_9BACE
fructose-1,6-bisphosphatase
L2_059_382G1_scaffold_521_5
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5656..6006)
DNA (351bp) protein (117aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Aspartate 1-decarboxylase n=14 Tax=Bacteroides RepID=PAND_BACV8
aspartate decarboxylase
L2_059_382G1_scaffold_521_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6028..6876)
DNA (849bp) protein (283aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
Pantothenate synthetase n=12 Tax=Bacteroides RepID=PANC_BACV8
pantoate--beta-alanine ligase
L2_059_382G1_scaffold_521_7
Bacteroides sp. 9_1_42FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7228..8052
DNA (825bp) protein (275aa)
Starch synthase catalytic domain protein n=5 Tax=Bacteroides RepID=C3Q091_9BACE
glycogen synthase
Starch synthase catalytic domain protein {ECO:0000313|EMBL:EEO61183.1}; TaxID=457395 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 9_1_42FAA.;"
L2_059_382G1_scaffold_521_8
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8072..9484
DNA (1413bp) protein (471aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3R4U5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY41042.1}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
hypothetical protein
L2_059_382G1_scaffold_521_9
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9737..10405
DNA (669bp) protein (223aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=C3R4U6_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB23048.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
L2_059_382G1_scaffold_521_10
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10917..11603
DNA (687bp) protein (229aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I8WQZ9_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EEB23046.1}; TaxID=483217 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei DSM 17855.;"
transposase
L2_059_382G1_scaffold_521_11
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12203..12580)
DNA (378bp) protein (126aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=A6L4C0_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEO44065.1}; TaxID=556260 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei 5_1_36/D4.;"
L2_059_382G1_scaffold_521_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12734..13858
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
DNA polymerase III subunit beta n=7 Tax=Bacteroides RepID=A6L4B9_BACV8
DNA polymerase III subunit beta
L2_059_382G1_scaffold_521_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13910..14686
DNA (777bp) protein (259aa)
DNA Pol III epsilon chain n=13 Tax=Bacteroides RepID=A6L4B8_BACV8
DNA polymerase III subunit epsilon
Exonuclease family protein {ECO:0000313|EMBL:KDS45071.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L2_059_382G1_scaffold_521_14
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14683..15144
DNA (462bp) protein (154aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase n=1 Tax=Bacteroides dorei CL03T12C01 RepID=I9G3Y4_9BACE
phosphopantothenoylcysteine decarboxylase
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase {ECO:0000313|EMBL:EOS13824.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
L2_059_382G1_scaffold_521_15
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15090..15641
DNA (552bp) protein (184aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EET17388.2}; EC=4.1.1.36 {ECO:0000313|EMBL:EET17388.2};; EC=6.3.2.5 {ECO:0000313|EMBL:EET17388.2};; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=5 Tax=root RepID=C6Z929_9BACE
flavoprotein
L2_059_382G1_scaffold_521_16
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15757..17418
DNA (1662bp) protein (554aa)
DNA repair protein RecN n=6 Tax=Bacteroides RepID=A6L4B6_BACV8
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
DNA repair protein recN
L2_059_382G1_scaffold_521_17
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17469..18236
DNA (768bp) protein (256aa)
RNA methyltransferase, TrmH family, group 3 n=2 Tax=Bacteroides vulgatus RepID=D4V9F5_BACVU
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EOS04876.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
tRNA/rRNA methyltransferase
L2_059_382G1_scaffold_521_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18273..19973
DNA (1701bp) protein (567aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V9F4_BACVU
Tetratricopeptide repeat family protein {ECO:0000313|EMBL:KDS32404.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
hypothetical protein
L2_059_382G1_scaffold_521_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20112..21416)
DNA (1305bp) protein (435aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P193_9BACE
tRNA(Ile)-lysidine synthetase
L2_059_382G1_scaffold_521_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21537..24005
DNA (2469bp) protein (823aa)
Ferrous iron transporter B n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HLE2_BACVU
Ferrous iron transporter B {ECO:0000313|EMBL:EOS04873.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
iron transport, fusion membrane protein
L2_059_382G1_scaffold_521_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24687..24860
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus dnLKV7 RepID=R9HLG7_BACVU
Uncharacterized protein {ECO:0000313|EMBL:KDS32400.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
glycosyltransferase
L2_059_382G1_scaffold_521_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24902..25093
DNA (192bp) protein (64aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=G1UM30_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS04871.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
hypothetical protein
L2_059_382G1_scaffold_521_23
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25793..28021
DNA (2229bp) protein (743aa)
Formate acetyltransferase {ECO:0000313|EMBL:KDS45080.1}; EC=2.3.1.54 {ECO:0000313|EMBL:KDS45080.1};; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Formate acetyltransferase n=7 Tax=Bacteroides RepID=A6L4A8_BACV8
formate acetyltransferase
L2_059_382G1_scaffold_521_24
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28090..28818
DNA (729bp) protein (243aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
Pyruvate formate-lyase 1-activating enzyme n=3 Tax=Bacteroides RepID=C6Z7P9_9BACE
pyruvate formate-lyase 1 activating enzyme
L2_059_382G1_scaffold_521_25
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28920..29507)
DNA (588bp) protein (196aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C6Z7P8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV65894.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L2_059_382G1_scaffold_521_26
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29511..30878)
DNA (1368bp) protein (456aa)
Electron transporter n=3 Tax=Bacteroides RepID=E5UYI3_9BACE
Putative iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EET16906.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
electron transport protein
L2_059_382G1_scaffold_521_27
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30875..31621)
DNA (747bp) protein (249aa)
Oxidoreductase n=7 Tax=Bacteroides RepID=E5UYI2_9BACE
Oxidoreductase {ECO:0000313|EMBL:EFV65892.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
oxidoreductase, glycolate oxidase
L2_059_382G1_scaffold_521_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31927..32538)
DNA (612bp) protein (204aa)
Transcriptional regulator n=6 Tax=Bacteroides RepID=A6L4A3_BACV8
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EOS04865.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L2_059_382G1_scaffold_521_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32535..33230)
DNA (696bp) protein (232aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L4A2_BACV8
hypothetical protein
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:KDS32393.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L2_059_382G1_scaffold_521_30
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33356..33820)
DNA (465bp) protein (155aa)
TspO/MBR family protein n=3 Tax=Bacteroides vulgatus RepID=D4V9E4_BACVU
outer membrane protein
TspO/MBR family protein {ECO:0000313|EMBL:KDS45088.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
Displaying items 1-30 of 47 in total

View Taxonomy