ggKbase home page

L2_059_382G1_scaffold_48

Search features with annotation key words

Displaying items 1-30 of 142 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_48_1
Alistipes sp. CAG:157, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3..629)
DNA (627bp) protein (209aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1262692 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:157.;"
Tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Alistipes sp. CAG:157 RepID=R5WFA5_9BACT
L2_059_382G1_scaffold_48_2
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

749..1639
DNA (891bp) protein (297aa)
Transcriptional regulator n=1 Tax=Alistipes sp. CAG:268 RepID=R6VC95_9BACT
Transcriptional regulator {ECO:0000313|EMBL:CDC95908.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
Transcriptional regulator
L2_059_382G1_scaffold_48_3
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1713..2084
DNA (372bp) protein (124aa)
Ribosomal silencing factor RsfS n=1 Tax=Alistipes sp. CAG:268 RepID=R6WP32_9BACT
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
iojap-related protein
L2_059_382G1_scaffold_48_4
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2088..4277
DNA (2190bp) protein (730aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=2 Tax=root RepID=B0MW75_9BACT
L2_059_382G1_scaffold_48_5
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4294..5157
DNA (864bp) protein (288aa)
CDP-diglyceride synthetase (EC:2.7.7.41)
Phosphatidate cytidylyltransferase n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JR81_9BACT
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:CDE66103.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L2_059_382G1_scaffold_48_6
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5188..5874
DNA (687bp) protein (229aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
Phosphatidylserine decarboxylase proenzyme n=3 Tax=Alistipes RepID=I3YP24_ALIFI
phosphatidylserine decarboxylase
L2_059_382G1_scaffold_48_7
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5898..7004
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JQ53_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE66105.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
FAD synthase
L2_059_382G1_scaffold_48_8

Not on your lists

7017..7397
DNA (381bp) protein (127aa)
Bifunctional riboflavin kinase/FMN adenylyltransferase domain protein n=2 Tax=root RepID=B0MW71_9BACT
Riboflavin biosynthesis protein RibF {ECO:0000313|EMBL:EKC56166.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
FAD synthase
L2_059_382G1_scaffold_48_9
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7408..8817
DNA (1410bp) protein (470aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrolase {ECO:0000256|HAMAP-Rule:MF_00563}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=Alistipes sp. CAG:268 RepID=R6VFI2_9BACT
L2_059_382G1_scaffold_48_10
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9034..11937)
DNA (2904bp) protein (968aa)
Peptidase M16 inactive domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z3G4_9BACT
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:CDD24997.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Zn-dependent peptidase
L2_059_382G1_scaffold_48_11
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11950..12462)
DNA (513bp) protein (171aa)
Uncharacterized protein n=3 Tax=Alistipes RepID=I3YP31_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL78749.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_059_382G1_scaffold_48_12
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12760..13116)
DNA (357bp) protein (119aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
L-aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=2 Tax=root RepID=R6WP18_9BACT
L2_059_382G1_scaffold_48_13
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13119..13955)
DNA (837bp) protein (279aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00094332}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00094309};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00094320}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
pantothenate synthetase (EC:6.3.2.1)
pantoate--beta-alanine ligase n=1 Tax=Alistipes onderdonkii RepID=UPI000367A716
L2_059_382G1_scaffold_48_14
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14322..16079)
DNA (1758bp) protein (586aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000313A0D8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76756.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_059_382G1_scaffold_48_15
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16079..17632)
DNA (1554bp) protein (518aa)
Fibrobacter succinogene major paralogous domain protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7UZA0_BACUN
Fibrobacter succinogene major paralogous domain protein {ECO:0000313|EMBL:EDO55784.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L2_059_382G1_scaffold_48_16
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18282..20309
DNA (2028bp) protein (676aa)
Peptidase family M49 n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JQ61_9BACT
Peptidase family M49 {ECO:0000313|EMBL:CDE66115.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
topoisomerase IA
L2_059_382G1_scaffold_48_17
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20447..20980)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y8Q5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25006.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L2_059_382G1_scaffold_48_18
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21001..21756)
DNA (756bp) protein (252aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YP38_ALIFI
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L2_059_382G1_scaffold_48_19
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21723..22154)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UK51_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ76079.1}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
hypothetical protein
L2_059_382G1_scaffold_48_20
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22151..23449)
DNA (1299bp) protein (433aa)
metalloendopeptidase n=1 Tax=Alistipes onderdonkii RepID=UPI00036C046E
metalloendopeptidase-like membrane protein
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:AFL78758.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L2_059_382G1_scaffold_48_21
Bacteroides sp. CAG:1060, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23760..25475
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:1060 RepID=R5BIC8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX53949.1}; TaxID=1262734 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:1060.;"
AraC family transcriptional regulator
L2_059_382G1_scaffold_48_22
Alistipes sp. CAG:831, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25544..27499
DNA (1956bp) protein (652aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0003650EB9
Uncharacterized protein {ECO:0000313|EMBL:CCY34943.1}; TaxID=1262698 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:831.;"
L2_059_382G1_scaffold_48_23
Alistipes sp. CAG:831, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27529..28650
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:831 RepID=R5HYL6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCY34943.1}; TaxID=1262698 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:831.;"
L2_059_382G1_scaffold_48_24
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28682..29977
DNA (1296bp) protein (432aa)
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Tetraacyldisaccharide 4'-kinase n=2 Tax=Alistipes RepID=D4INA7_9BACT
L2_059_382G1_scaffold_48_25
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29961..30767
DNA (807bp) protein (269aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
purine nucleoside phosphorylase I, inosine and guanosine-specific (EC:2.4.2.1)
Purine nucleoside phosphorylase n=3 Tax=root RepID=B0MWG7_9BACT
L2_059_382G1_scaffold_48_26
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30770..31231
DNA (462bp) protein (154aa)
Single-stranded DNA-binding protein n=3 Tax=root RepID=B0MWG8_9BACT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
single stranded DNA-binding protein
L2_059_382G1_scaffold_48_27
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31344..32072)
DNA (729bp) protein (243aa)
Oxidoreductase short chain dehydrogenase/reductase family protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XX36_9BACT
Oxidoreductase short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CDD26205.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
short-chain dehydrogenase
L2_059_382G1_scaffold_48_28
unknown

Not on your lists

32126..32860
DNA (735bp) protein (245aa)

This feature has no annotations

L2_059_382G1_scaffold_48_29
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32836..33273)
DNA (438bp) protein (146aa)
CMP deaminase n=1 Tax=Alistipes onderdonkii RepID=UPI00036EFAAD
Deoxycytidylate deaminase {ECO:0000313|EMBL:CDC95876.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
deoxycytidylate deaminase
L2_059_382G1_scaffold_48_30
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33352..36651)
DNA (3300bp) protein (1100aa)
Protein translocase subunit SecA n=1 Tax=Alistipes sp. HGB5 RepID=E4MDG2_9BACT
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Preprotein translocase subunit SecA
Displaying items 1-30 of 142 in total

View Taxonomy