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L2_059_382G1_scaffold_648

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_648_1
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..973)
DNA (972bp) protein (324aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632};; Imidazolonepropionate hydrolase {ECO:0000256|HAMAP-Rule:MF_00577}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MXP4_9BACT
L2_059_382G1_scaffold_648_2
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(994..2697)
DNA (1704bp) protein (568aa)
Glutamate formimidoyltransferase {ECO:0000313|EMBL:EDS02379.1}; EC=2.1.2.5 {ECO:0000313|EMBL:EDS02379.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Glutamate formimidoyltransferase n=3 Tax=root RepID=B0MXP3_9BACT
glutamate formiminotransferase
L2_059_382G1_scaffold_648_3
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3067..5037)
DNA (1971bp) protein (657aa)
TonB-dependent receptor n=2 Tax=root RepID=B0MXP2_9BACT
TonB-dependent receptor {ECO:0000313|EMBL:EDS02378.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
outer membrane cobalamin receptor protein
L2_059_382G1_scaffold_648_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5278..6105)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6YAG3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25601.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
putative AraC-family transcriptional regulator
L2_059_382G1_scaffold_648_5
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6349..7905
DNA (1557bp) protein (519aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5HAQ6_9BACT
putative two-component regulatory system histidine kinase
L2_059_382G1_scaffold_648_6
Alistipes indistinctus, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7909..10650
DNA (2742bp) protein (914aa)
Putative uncharacterized protein n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5HAQ5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHB91671.1}; TaxID=742725 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes indistinctus YIT 12060.;"
signal transduction histidine kinase
L2_059_382G1_scaffold_648_7
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(10947..11456)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BVQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX55486.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
putative cytochrome c
L2_059_382G1_scaffold_648_8
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11469..11729)
DNA (261bp) protein (87aa)
Transglycosylase associated protein n=2 Tax=Alistipes RepID=B0MXP0_9BACT
Transglycosylase associated protein {ECO:0000313|EMBL:CDE63969.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
Transglycosylase associated protein.
L2_059_382G1_scaffold_648_9
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11847..13139)
DNA (1293bp) protein (431aa)
Cysteate synthase n=1 Tax=Alistipes putredinis CAG:67 RepID=R7JJU0_9BACT
Cysteate synthase {ECO:0000313|EMBL:EDS02368.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
cysteate synthase
L2_059_382G1_scaffold_648_10
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13158..14288)
DNA (1131bp) protein (377aa)
carboxynorspermidine decarboxylase (EC:4.1.1.-)
Carboxynorspermidine decarboxylase n=3 Tax=root RepID=B0MXM6_9BACT
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:CDE63960.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L2_059_382G1_scaffold_648_11
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14616..15710)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=4 Tax=root RepID=B0MVM6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS04110.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L2_059_382G1_scaffold_648_12
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(15883..17292)
DNA (1410bp) protein (470aa)
Saccharopine dehydrogenase {ECO:0000313|EMBL:EDS02366.1}; EC=1.5.1.7 {ECO:0000313|EMBL:EDS02366.1};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
saccharopine dehydrogenase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002EA144E
carboxynorspermidine dehydrogenase
L2_059_382G1_scaffold_648_13
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17587..19557
DNA (1971bp) protein (657aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E28EC4
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDS02209.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
Predicted nucleoside-diphosphate sugar epimerases
L2_059_382G1_scaffold_648_14
Prevotella sp. CAG:617, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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19578..20555
DNA (978bp) protein (326aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=Prevotella sp. CAG:617 RepID=R7PB12_9BACT
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:CDF21493.1}; TaxID=1262933 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:617.;"
vipB; Vi polysaccharide biosynthesis protein VipB/TviC
L2_059_382G1_scaffold_648_15
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20580..21845
DNA (1266bp) protein (422aa)
Vi polysaccharide biosynthesis protein vipA/tviB n=1 Tax=Bacteroides gallinarum RepID=UPI000370AED4
UDP-glucose-6 dehydrogenase {ECO:0000313|EMBL:CCZ81898.1}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter laneus CAG:561.;"
UDP-glucose-6 dehydrogenase
L2_059_382G1_scaffold_648_16
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21898..22842
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B474AC
putative acyltransferase
Putative acyltransferase {ECO:0000313|EMBL:AFL75422.1}; Flags: Precursor;; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
L2_059_382G1_scaffold_648_17
Mucinivorans hirudinis, Mucinivorans, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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22970..24340
DNA (1371bp) protein (457aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDN30877.1}; TaxID=1433126 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans.;" source="Mucinivorans hirudinis.;"
L2_059_382G1_scaffold_648_18
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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24328..25755
DNA (1428bp) protein (476aa)
Polysaccharide biosynthesis protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AA38_9BACE
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:CDA47855.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
polysaccharide biosynthesis protein
L2_059_382G1_scaffold_648_19
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25765..27021
DNA (1257bp) protein (419aa)
glycoside hydrolase family protein (EC:2.4.1.-)
Sugar transferase, PEP-CTERM/EpsH1 system associated n=1 Tax=Cecembia lonarensis LW9 RepID=K1L2W6_9BACT
Sugar transferase, PEP-CTERM/EpsH1 system associated {ECO:0000313|EMBL:EKB49151.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
L2_059_382G1_scaffold_648_20
unknown

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27014..28339
DNA (1326bp) protein (442aa)

This feature has no annotations

L2_059_382G1_scaffold_648_21
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

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28332..28922
DNA (591bp) protein (197aa)
transferase id=7202380 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
Tax=RIFOXYC12_FULL_TA06_54_24_curated
L2_059_382G1_scaffold_648_22
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28925..30103
DNA (1179bp) protein (393aa)
Glycosyl transferase group 1 n=1 Tax=Bacteroides sp. CAG:661 RepID=R5S6B6_9BACE
Glycosyltransferase {ECO:0000313|EMBL:GAO31650.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM 15548.;"
group 1 glycosyl transferase
L2_059_382G1_scaffold_648_23
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30246..31379
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I8YHZ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY61992.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
hypothetical protein
L2_059_382G1_scaffold_648_24
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31403..31801
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Bacteroides gallinarum RepID=UPI000378A7B8
Uncharacterized protein {ECO:0000313|EMBL:EKN12230.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
hypothetical protein
L2_059_382G1_scaffold_648_25

Not on your lists

31774..32382
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=gut metagenome RepID=J9FJS8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EJW89902.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
L2_059_382G1_scaffold_648_26
Bacteroides sp. CAG:189, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32373..33161
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:189 RepID=R5JLJ4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY49896.1}; TaxID=1262737 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:189.;"
hypothetical protein
Displaying 26 items

View Taxonomy