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L2_059_382G1_scaffold_894

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_894_1
unknown

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1..477
DNA (477bp) protein (159aa)

This feature has no annotations

L2_059_382G1_scaffold_894_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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771..1202
DNA (432bp) protein (144aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6J5_9ACTN
L2_059_382G1_scaffold_894_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1199..2599
DNA (1401bp) protein (467aa)
NusB family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6J4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73372.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
NusB/RsmB/TIM44
L2_059_382G1_scaffold_894_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(2740..2976)
DNA (237bp) protein (79aa)
Putative regulatory protein (CxxC_CxxC_SSSS) n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB67_9ACTN
Putative regulatory protein (CxxC_CxxC_SSSS) {ECO:0000313|EMBL:CDA36075.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
FmdB family regulatory protein
L2_059_382G1_scaffold_894_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(3065..6361)
DNA (3297bp) protein (1099aa)
4-alpha-glucanotransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHQ3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73374.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
4-alpha-glucanotransferase
L2_059_382G1_scaffold_894_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(6580..8835)
DNA (2256bp) protein (752aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
glycogen/starch synthase (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8S3_9ACTN
L2_059_382G1_scaffold_894_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(8926..10053)
DNA (1128bp) protein (376aa)
Glucose-1-phosphate adenylyltransferase, GlgD subunit {ECO:0000313|EMBL:EBA40347.1}; EC=2.7.7.27 {ECO:0000313|EMBL:EBA40347.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
glucose-1-phosphate adenylyltransferase subunit GlgD (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6I8_9ACTN
L2_059_382G1_scaffold_894_8
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(10058..11206)
DNA (1149bp) protein (383aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
nucleotidyl transferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=2 Tax=Collinsella RepID=A4E6I7_9ACTN
L2_059_382G1_scaffold_894_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(11315..13741)
DNA (2427bp) protein (809aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6I6_9ACTN
L2_059_382G1_scaffold_894_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(13836..16097)
DNA (2262bp) protein (754aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
1,4-alpha-glucan-branching protein (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6I5_9ACTN
L2_059_382G1_scaffold_894_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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16429..17118
DNA (690bp) protein (230aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6I4_9ACTN
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EBA40343.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
thiamine pyrophosphokinase
L2_059_382G1_scaffold_894_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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17167..17793
DNA (627bp) protein (209aa)
Thiamine diphosphokinase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8X5_9ACTN
Thiamine pyrophosphokinase {ECO:0000313|EMBL:KGI73381.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
thiamine pyrophosphokinase
L2_059_382G1_scaffold_894_13
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

18773..19381
DNA (609bp) protein (203aa)
Conserved domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6I1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73382.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
NusG antitermination factor
L2_059_382G1_scaffold_894_14
Eggerthella sp. CAG:1427, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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19359..20147
DNA (789bp) protein (263aa)
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6)
Undecaprenyl-phosphate galactose phosphotransferase n=1 Tax=Eggerthella sp. CAG:1427 RepID=R5FJU3_9ACTN
Undecaprenyl-phosphate galactose phosphotransferase {ECO:0000313|EMBL:CCY05113.1}; TaxID=1262874 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:1427.;"
L2_059_382G1_scaffold_894_15
Collinsella sp. CAG:398, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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20270..21367
DNA (1098bp) protein (366aa)
Glycosyl transferase group 1 n=1 Tax=Collinsella sp. CAG:398 RepID=R6ZDH2_9ACTN
Glycosyl transferase group 1 {ECO:0000313|EMBL:CDD41504.1}; TaxID=1262852 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:398.;"
group 1 glycosyl transferase
L2_059_382G1_scaffold_894_16
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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21360..22418
DNA (1059bp) protein (353aa)
Polysaccharide biosynthesis protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA78_9ACTN
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EEA90806.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
Predicted nucleoside-diphosphate sugar epimerases
L2_059_382G1_scaffold_894_17
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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22420..23637
DNA (1218bp) protein (406aa)
NAD dependent epimerase/dehydratase family protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA79_9ACTN
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EEA90807.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L2_059_382G1_scaffold_894_18
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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23642..24898
DNA (1257bp) protein (419aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EEA90808.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EEA90808.1};; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6GA80_9ACTN
Displaying 18 items

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