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L2_059_382G1_scaffold_2373

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_2373_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..606)
DNA (606bp) protein (202aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
SSU ribosomal protein S12P methylthiotransferase (EC:1.3.1.74 2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Clostridium sp. MSTE9 RepID=J0N4T8_9CLOT
L2_059_382G1_scaffold_2373_2
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(666..1295)
DNA (630bp) protein (210aa)
Regulatory protein RecX n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTU0_9CLOT
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L2_059_382G1_scaffold_2373_3
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1295..2425)
DNA (1131bp) protein (377aa)
Protein RecA n=1 Tax=Clostridium leptum DSM 753 RepID=A7VTT9_9CLOT
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
RecA protein
L2_059_382G1_scaffold_2373_4
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2564..3427)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003718B13
Protein-(Glutamine-N5) methyltransferase, release factor-specific {ECO:0000313|EMBL:EJF41841.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
protein-(glutamine-N5) methyltransferase, release factor-specific
L2_059_382G1_scaffold_2373_5
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3453..4424)
DNA (972bp) protein (324aa)
PF07136 family protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0NB33_9CLOT
PF07136 family protein {ECO:0000313|EMBL:EJF41822.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Predicted metal-dependent enzyme
L2_059_382G1_scaffold_2373_6
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4417..5877)
DNA (1461bp) protein (487aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
GHKL domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H889_9CLOT
integral membrane sensor signal transduction histidine kinase
L2_059_382G1_scaffold_2373_7
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5944..6651)
DNA (708bp) protein (236aa)
PhoP family transcriptional regulator n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036DDFAF
Response regulator receiver domain protein {ECO:0000313|EMBL:EJF41817.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_059_382G1_scaffold_2373_8
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6719..8158)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J1H925_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF41833.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L2_059_382G1_scaffold_2373_9
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8391..8969)
DNA (579bp) protein (193aa)
Hydrolase, NUDIX family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHJ4_9FIRM
Hydrolase, NUDIX family {ECO:0000313|EMBL:EDS08962.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
hypothetical protein
L2_059_382G1_scaffold_2373_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9060..10019)
DNA (960bp) protein (320aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI0003781ADA
Putative ATP-dependent RNA helicase RhlE {ECO:0000313|EMBL:EHM40436.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
DEAD/DEAH box helicase domain-containing protein
Displaying 10 items

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