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L2_059_382G1_scaffold_2516

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_2516_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..2693)
DNA (2691bp) protein (897aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
DNA polymerase III catalytic subunit, PolC type (EC:2.7.7.7)
DNA polymerase III polC-type n=1 Tax=Clostridium sp. MSTE9 RepID=J0X0Z5_9CLOT
L2_059_382G1_scaffold_2516_2
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2730..3776)
DNA (1047bp) protein (349aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00035FDF16
L2_059_382G1_scaffold_2516_3
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3870..4940)
DNA (1071bp) protein (357aa)
Peptidase, M50 family {ECO:0000313|EMBL:EJF42483.1}; EC=3.4.24.- {ECO:0000313|EMBL:EJF42483.1};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Peptidase, M50 family n=1 Tax=Clostridium sp. MSTE9 RepID=J1HAT8_9CLOT
membrane-associated zinc metalloprotease
L2_059_382G1_scaffold_2516_4
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4991..6139)
DNA (1149bp) protein (383aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Clostridium sp. MSTE9 RepID=J0X1L7_9CLOT
L2_059_382G1_scaffold_2516_5
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6235..7050)
DNA (816bp) protein (272aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00037CC10D
phosphatidate cytidylyltransferase
L2_059_382G1_scaffold_2516_6
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7051..7776)
DNA (726bp) protein (242aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
Undecaprenyl pyrophosphate synthetase (EC:2.5.1.31)
Isoprenyl transferase n=1 Tax=Clostridium sp. MSTE9 RepID=J0N6L9_9CLOT
L2_059_382G1_scaffold_2516_7
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7786..8340)
DNA (555bp) protein (185aa)
ribosome recycling factor n=1 Tax=Clostridium sporosphaeroides RepID=UPI000361C241
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
ribosome recycling factor
L2_059_382G1_scaffold_2516_8
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8345..9058)
DNA (714bp) protein (238aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Clostridium sp. CAG:964 RepID=R6U8R2_9CLOT
L2_059_382G1_scaffold_2516_9
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9314..9505
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HGB1_9CLOT
Manganese containing catalase {ECO:0000313|EMBL:KJJ70666.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Displaying 9 items

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