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L2_059_382G1_scaffold_2986

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_2986_1
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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720..2903
DNA (2184bp) protein (728aa)
ATPase P (EC:3.6.3.4)
Copper-exporting ATPase n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2ERF0_CLOS4
Copper-exporting ATPase {ECO:0000313|EMBL:ERI97382.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
L2_059_382G1_scaffold_2986_2
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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2910..3182
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXH6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL65760.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L2_059_382G1_scaffold_2986_3
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3556..5337)
DNA (1782bp) protein (594aa)
Membrane proteins related to metalloendopeptidases n=1 Tax=Eubacterium sp. CAG:115 RepID=R5LJL8_9FIRM
Membrane proteins related to metalloendopeptidases {ECO:0000313|EMBL:CCY73197.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
Membrane proteins related to metalloendopeptidases
L2_059_382G1_scaffold_2986_4
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5557..6024)
DNA (468bp) protein (156aa)
quorum-sensing autoinducer 2 (AI-2), LuxS (EC:4.4.1.21)
S-ribosylhomocysteine lyase {ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|SAAS:SAAS00059628};; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
Quorum-sensing autoinducer 2 (AI-2), LuxS n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U7J1_ETHHY
L2_059_382G1_scaffold_2986_5
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6160..6882)
DNA (723bp) protein (241aa)
Polar amino acid transport system ATP-binding protein (EC:3.6.3.21)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9Q6_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG31821.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
L2_059_382G1_scaffold_2986_6
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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comp(6869..7621)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TN61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC73635.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
L2_059_382G1_scaffold_2986_7
Clostridium sp. CAG:609, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7743..7985)
DNA (243bp) protein (81aa)
ABC transporter substrate-binding protein family 3 n=1 Tax=Clostridium sp. CAG:609 RepID=R7P4W4_9CLOT
ABC transporter substrate-binding protein family 3 {ECO:0000313|EMBL:CDF19925.1}; TaxID=1262827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:609.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
Displaying 7 items

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