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L2_059_382G1_scaffold_1800

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_1800_1
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..561)
DNA (561bp) protein (187aa)
R3H domain protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0MXY3_9CLOT
R3H domain protein {ECO:0000313|EMBL:EJF39249.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
single-stranded nucleic acid binding R3H domain-containing protein
L2_059_382G1_scaffold_1800_2
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(618..1691)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036A00A9
60Kd inner membrane protein {ECO:0000313|EMBL:EJF39256.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
L2_059_382G1_scaffold_1800_3
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1837..2100)
DNA (264bp) protein (88aa)
Putative membrane protein insertion efficiency factor n=2 Tax=Clostridium RepID=A7VRT2_9CLOT
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
protein of unknown function DUF37
L2_059_382G1_scaffold_1800_4
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2097..2432)
DNA (336bp) protein (112aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
ribonuclease P protein component, eubacterial (EC:3.1.26.5)
ribonuclease P n=1 Tax=Clostridium sporosphaeroides RepID=UPI000377C6B6
L2_059_382G1_scaffold_1800_5
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3049..3813)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9J9U8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS27922.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L2_059_382G1_scaffold_1800_6
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4466..5773
DNA (1308bp) protein (436aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Clostridium sp. MSTE9 RepID=J0N4B0_9CLOT
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
chromosomal replication initiator protein DnaA
L2_059_382G1_scaffold_1800_7
unknown

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comp(5680..5895)
DNA (216bp) protein (72aa)

This feature has no annotations

L2_059_382G1_scaffold_1800_8
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6238..7338
DNA (1101bp) protein (367aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Clostridium sp. MSTE9 RepID=J1H255_9CLOT
L2_059_382G1_scaffold_1800_9
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7417..7680
DNA (264bp) protein (88aa)
S4 domain protein n=2 Tax=Clostridium RepID=A7VRS3_9CLOT
S4 domain protein {ECO:0000313|EMBL:CDC05162.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L2_059_382G1_scaffold_1800_10
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7677..8780
DNA (1104bp) protein (368aa)
DNA replication and repair protein RecF n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6YJ29_9FIRM
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
DNA replication and repair protein RecF
L2_059_382G1_scaffold_1800_11
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8818..9120
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Clostridium sp. MSTE9 RepID=J0WSC2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJF39291.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L2_059_382G1_scaffold_1800_12
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9183..9695
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI000364859F
Uncharacterized protein {ECO:0000313|EMBL:EJF39293.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
hypothetical protein
L2_059_382G1_scaffold_1800_13
unknown

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9703..10083
DNA (381bp) protein (127aa)

This feature has no annotations

L2_059_382G1_scaffold_1800_14
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10222..12159
DNA (1938bp) protein (646aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=2 Tax=Clostridium RepID=A7VRR9_9CLOT
L2_059_382G1_scaffold_1800_15
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12249..12947
DNA (699bp) protein (233aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VRR8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC05167.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Displaying 15 items

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