ggKbase home page

L2_059_382G1_scaffold_3848

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_3848_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..120)
DNA (120bp) protein (40aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0P7_9FIRM
ABC-type sugar transport system, periplasmic component
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:CBL27607.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_3848_2
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(642..827)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N1ZSB8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ19899.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
L2_059_382G1_scaffold_3848_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(851..1756)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FT40_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80803.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L2_059_382G1_scaffold_3848_4
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1732..3765)
DNA (2034bp) protein (678aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FT39_9CLOT
L2_059_382G1_scaffold_3848_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3768..4415)
DNA (648bp) protein (216aa)
ABC transporter, permease protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FT38_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EEA80801.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_059_382G1_scaffold_3848_6
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4399..5292)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LQ31_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85644.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
lactose transport system (permease)
L2_059_382G1_scaffold_3848_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5364..6647)
DNA (1284bp) protein (428aa)
Lactose-binding protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FT36_9CLOT
Lactose-binding protein {ECO:0000313|EMBL:EEA80799.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
extracellular solute-binding protein family 1 protein
L2_059_382G1_scaffold_3848_8
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6664..7515)
DNA (852bp) protein (284aa)
frlD; fructoselysine 6-kinase (EC:2.7.1.-)
Kinase, PfkB family n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BD42_9FIRM
Kinase, PfkB family {ECO:0000313|EMBL:EEG88993.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
L2_059_382G1_scaffold_3848_9
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7525..8184)
DNA (660bp) protein (220aa)
SIS domain protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BD43_9FIRM
SIS domain protein {ECO:0000313|EMBL:EEG88994.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Predicted phosphosugar isomerases
L2_059_382G1_scaffold_3848_10
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8281..8520)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:257 RepID=R5WQG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB20909.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
Predicted phosphosugar isomerases
L2_059_382G1_scaffold_3848_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8836..9546
DNA (711bp) protein (237aa)
UbiC transcription regulator-associated domain protein n=2 Tax=Clostridiales RepID=B6FT32_9CLOT
UbiC transcription regulator-associated domain protein {ECO:0000313|EMBL:EEA80808.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
GntR family transcriptional regulator
L2_059_382G1_scaffold_3848_12
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9543..10097
DNA (555bp) protein (185aa)
UbiC transcription regulator-associated domain protein n=2 Tax=Clostridiales RepID=B6FT31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB20852.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
GntR family transcriptional regulator
L2_059_382G1_scaffold_3848_13
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10514..10876)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WXD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77591.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Transposase and inactivated derivatives
L2_059_382G1_scaffold_3848_14
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10869..11006)
DNA (138bp) protein (46aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVF0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL24758.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_059_382G1_scaffold_3848_15
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11003..11245)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVF0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL24758.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L2_059_382G1_scaffold_3848_16
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11348..12097)
DNA (750bp) protein (250aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MAL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS68109.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
transposase
L2_059_382G1_scaffold_3848_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12297..12440)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FT47_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80793.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
Displaying 17 items

View Taxonomy