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L2_059_382G1_scaffold_2018

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_2018_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(203..1366)
DNA (1164bp) protein (388aa)
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase (EC:3.5.1.16 3.5.1.18)
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:CBL26073.1}; EC=3.5.1.16 {ECO:0000313|EMBL:CBL26073.1};; EC=3.5.1.18 {ECO:0000313|EMBL:CBL26073.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4B1_9FIRM
L2_059_382G1_scaffold_2018_2
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1444..1815)
DNA (372bp) protein (124aa)
50S ribosomal protein L7/L12 n=2 Tax=Clostridiales RepID=D4M4B0_9FIRM
LSU ribosomal protein L12P
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_2018_3
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(1908..2441)
DNA (534bp) protein (178aa)
50S ribosomal protein L10 n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PGY0_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_382G1_scaffold_2018_4
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2781..3473)
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=2 Tax=Clostridiales RepID=D4M4A9_9FIRM
ribosomal protein L1, bacterial/chloroplast
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_2018_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(3626..4051)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=2 Tax=Clostridiales RepID=D4M4A8_9FIRM
LSU ribosomal protein L11P
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_2018_6
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4104..4622)
DNA (519bp) protein (173aa)
Transcription termination/antitermination protein NusG n=2 Tax=Clostridiales RepID=D4M4A7_9FIRM
transcription antitermination protein nusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_2018_7
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4648..4845)
DNA (198bp) protein (66aa)
Protein translocase subunit SecE n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4A6_9FIRM
protein translocase subunit secE/sec61 gamma
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_2018_8
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5209..6372)
DNA (1164bp) protein (388aa)
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4A5_9FIRM
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control {ECO:0000313|EMBL:CBL26067.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
L2_059_382G1_scaffold_2018_9
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6390..7154)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q709_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17742.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
L2_059_382G1_scaffold_2018_10
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7180..7902)
DNA (723bp) protein (241aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4A4_9FIRM
DnaJ-class molecular chaperone with C-terminal Zn finger domain
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:CBL26066.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_2018_11
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8021..8428)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PAH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17744.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_382G1_scaffold_2018_12
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8654..9544)
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4A3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL26065.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_2018_13
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9562..11070)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PGZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17746.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_382G1_scaffold_2018_14
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11083..11631)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q713_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17747.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_382G1_scaffold_2018_15
unknown

Not on your lists

comp(11600..11704)
DNA (105bp) protein (35aa)

This feature has no annotations

L2_059_382G1_scaffold_2018_16
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11688..12692)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P043_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17748.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ABC transporter
L2_059_382G1_scaffold_2018_17
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12881..13756)
DNA (876bp) protein (292aa)
Lysophospholipase L1 and related esterases n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PAH6_9FIRM
Lysophospholipase L1 and related esterases {ECO:0000313|EMBL:CDC17749.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Lysophospholipase L1 and related esterases
L2_059_382G1_scaffold_2018_18
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13818..16451)
DNA (2634bp) protein (878aa)
ATPase involved in DNA repair n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P2R9_9FIRM
ATPase involved in DNA repair {ECO:0000313|EMBL:CDC17750.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ATPase involved in DNA repair
L2_059_382G1_scaffold_2018_19
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16448..17608)
DNA (1161bp) protein (387aa)
Exonuclease SbcD n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PGZ4_9FIRM
Exonuclease SbcD {ECO:0000313|EMBL:CDC17751.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
exonuclease SbcD
L2_059_382G1_scaffold_2018_20
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17632..18063)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q717_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17752.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_2018_21
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18104..18664)
DNA (561bp) protein (187aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P046_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CDC17753.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_382G1_scaffold_2018_22
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18681..20387)
DNA (1707bp) protein (569aa)
Predicted ATPase of the ABC class n=1 Tax=Ruminococcus torques L2-14 RepID=D4M497_9FIRM
Predicted ATPase of the ABC class {ECO:0000313|EMBL:CBL26059.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Predicted ATPase of the ABC class
L2_059_382G1_scaffold_2018_23
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20598..22712)
DNA (2115bp) protein (705aa)
Uncharacterized protein related to glutamine synthetase (EC:6.3.1.2)
Uncharacterized protein related to glutamine synthetase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P2S3_9FIRM
Uncharacterized protein related to glutamine synthetase {ECO:0000313|EMBL:CDC17755.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_2018_24
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23006..23869)
DNA (864bp) protein (288aa)
fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist (EC:4.1.2.13)
Fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist {ECO:0000313|EMBL:CBL26057.1}; EC=4.1.2.13 {ECO:0000313|EMBL:CBL26057.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist n=1 Tax=Ruminococcus torques L2-14 RepID=D4M495_9FIRM
L2_059_382G1_scaffold_2018_25
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24178..25071)
DNA (894bp) protein (298aa)
RNA polymerase sigma-54 factor n=1 Tax=Ruminococcus torques L2-14 RepID=D4M494_9FIRM
RNA polymerase sigma-54 factor
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:CBL26056.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_2018_26
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25031..25255)
DNA (225bp) protein (75aa)
RNA polymerase sigma-54 factor n=1 Tax=Ruminococcus torques L2-14 RepID=D4M494_9FIRM
RNA polymerase sigma-54 factor
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:CBL26056.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Displaying 26 items

View Taxonomy