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L2_059_382G1_scaffold_2211

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_2211_1
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..704)
DNA (702bp) protein (234aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2Y271_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86482.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L2_059_382G1_scaffold_2211_2
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(795..2174)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2Z3B4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86483.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L2_059_382G1_scaffold_2211_3
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2316..3056
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2Y851_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86484.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
AraC family transcriptional regulator
L2_059_382G1_scaffold_2211_4
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3162..5861)
DNA (2700bp) protein (900aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3ALW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86485.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
hypothetical protein
L2_059_382G1_scaffold_2211_5
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5884..8298)
DNA (2415bp) protein (805aa)
chitobiose phosphorylase (EC:2.4.1.-)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2YM47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG86486.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L2_059_382G1_scaffold_2211_6
unknown

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comp(8295..8522)
DNA (228bp) protein (76aa)

This feature has no annotations

L2_059_382G1_scaffold_2211_7
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8552..9055
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PXI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC14447.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_382G1_scaffold_2211_8
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9118..10935)
DNA (1818bp) protein (606aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P188_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDC14454.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ABC-type multidrug transport system, ATPase and permease components
L2_059_382G1_scaffold_2211_9
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10928..11551)
DNA (624bp) protein (208aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NTB6_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDC14460.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ABC-type multidrug transport system, ATPase and permease components
L2_059_382G1_scaffold_2211_10
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11575..13080)
DNA (1506bp) protein (502aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NTB6_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDC14460.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ABC-type multidrug transport system, ATPase and permease components
L2_059_382G1_scaffold_2211_11
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13212..13640)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P7H4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC14471.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
MarR-like transcriptional regulator
L2_059_382G1_scaffold_2211_12
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13922..14593)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P7H9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC14476.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_382G1_scaffold_2211_13
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14593..15441)
DNA (849bp) protein (283aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6B9_9FIRM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CBL26781.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_2211_14
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(15444..15818)
DNA (375bp) protein (125aa)
Predicted transcriptional regulators n=2 Tax=Firmicutes RepID=R5XK87_9FIRM
Predicted transcriptional regulators {ECO:0000313|EMBL:CDA15260.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
Predicted transcriptional regulators
L2_059_382G1_scaffold_2211_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16072..17436)
DNA (1365bp) protein (455aa)
DNA repair protein radA n=2 Tax=Clostridiales RepID=D4M6B7_9FIRM
DNA repair protein RadA
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_2211_16
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17572..17985)
DNA (414bp) protein (138aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6B6_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL26778.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_2211_17
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18089..20383)
DNA (2295bp) protein (765aa)
ATPases with chaperone activity ATP-binding subunit n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NQL2_9FIRM
ATPases with chaperone activity ATP-binding subunit {ECO:0000313|EMBL:CDC14493.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ATPases with chaperone activity, ATP-binding subunit
L2_059_382G1_scaffold_2211_18
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20416..20799)
DNA (384bp) protein (128aa)
Transcriptional regulator, GntR family n=2 Tax=Clostridiales RepID=D4M6B4_9FIRM
transcriptional regulator, GntR family
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDC14499.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_2211_19
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20783..22255)
DNA (1473bp) protein (491aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Signal transduction histidine kinase (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NQP7_9FIRM
L2_059_382G1_scaffold_2211_20
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22280..22954)
DNA (675bp) protein (225aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=2 Tax=Clostridiales RepID=D4M6B3_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDC14505.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_2211_21
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22971..23633)
DNA (663bp) protein (221aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PXS4_9FIRM
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
phosphate uptake regulator, PhoU
L2_059_382G1_scaffold_2211_22
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23637..24407)
DNA (771bp) protein (257aa)
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) n=2 Tax=Clostridiales RepID=D4M6B1_9FIRM
L2_059_382G1_scaffold_2211_23
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24494..25363)
DNA (870bp) protein (290aa)
Phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1) n=2 Tax=Clostridiales RepID=D4M6B0_9FIRM
phosphate ABC transporter membrane protein 2, PhoT family (TC 3.A.1.7.1)
Phosphate ABC transporter membrane protein 2 PhoT family (TC 3.A.1.7.1) {ECO:0000313|EMBL:CDC14512.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_2211_24
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25378..26229)
DNA (852bp) protein (284aa)
Phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1) n=2 Tax=Clostridiales RepID=D4M6A9_9FIRM
phosphate ABC transporter membrane protein 1, PhoT family (TC 3.A.1.7.1)
Phosphate ABC transporter membrane protein 1 PhoT family (TC 3.A.1.7.1) {ECO:0000313|EMBL:CDC14514.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_2211_25
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26365..27279)
DNA (915bp) protein (305aa)
Phosphate ABC transporter substrate-binding protein PhoT family (TC 3.A.1.7.1) n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PXT7_9FIRM
Phosphate ABC transporter substrate-binding protein PhoT family (TC 3.A.1.7.1) {ECO:0000313|EMBL:CDC14517.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1)
L2_059_382G1_scaffold_2211_26
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27714..27977)
DNA (264bp) protein (88aa)
Predicted integral membrane protein n=2 Tax=Clostridiales RepID=D4M6A6_9FIRM
Predicted integral membrane protein
Predicted integral membrane protein {ECO:0000313|EMBL:CDC14519.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_2211_27
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28120..31167)
DNA (3048bp) protein (1016aa)
Predicted kinase related to galactokinase and mevalonate kinase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6A5_9FIRM
Predicted kinase related to galactokinase and mevalonate kinase
Predicted kinase related to galactokinase and mevalonate kinase {ECO:0000313|EMBL:CBL26767.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_2211_28
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31401..32432)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P1J0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC14524.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_382G1_scaffold_2211_29
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32723..33616)
DNA (894bp) protein (298aa)
Phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|SAAS:SAAS00093350, ECO:0000313|EMBL:CBL26766.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Phosphatidylserine decarboxylase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6A4_9FIRM
L2_059_382G1_scaffold_2211_30
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33628..34251)
DNA (624bp) protein (208aa)
Phosphatidylserine synthase (EC:2.7.8.8)
Phosphatidylserine synthase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PXV5_9FIRM
Phosphatidylserine synthase {ECO:0000313|EMBL:CDC14537.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Displaying items 1-30 of 56 in total

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