ggKbase home page

L2_059_382G1_scaffold_2487

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_2487_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..94)
DNA (93bp) protein (31aa)
Beta-fructosidases (levanase/invertase) (EC:3.2.1.65)
Beta-fructosidases (Levanase/invertase) {ECO:0000313|EMBL:CBL27608.1}; EC=3.2.1.65 {ECO:0000313|EMBL:CBL27608.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Beta-fructosidases (Levanase/invertase) n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0P8_9FIRM
L2_059_382G1_scaffold_2487_2
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(149..340)
DNA (192bp) protein (64aa)
Beta-fructosidases (levanase/invertase) (EC:3.2.1.65)
Beta-fructosidases (Levanase/invertase) n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0P8_9FIRM
Glycosyl hydrolase family 32 {ECO:0000313|EMBL:EEA80792.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L2_059_382G1_scaffold_2487_3

Not on your lists

420..860
DNA (441bp) protein (147aa)
ISSag9, transposase (Fragment) n=1 Tax=human gut metagenome RepID=K1SEC5_9ZZZZ
ISSag9, transposase {ECO:0000313|EMBL:EKC45781.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L2_059_382G1_scaffold_2487_4
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1197..2024)
DNA (828bp) protein (276aa)
SIS domain protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4J6_9CLOT
SIS domain protein {ECO:0000313|EMBL:EEG72989.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Transcriptional regulators
L2_059_382G1_scaffold_2487_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2086..2535)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B8M2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN75731.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
transposase for insertion sequence element
L2_059_382G1_scaffold_2487_6
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2549..3058)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MIS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS70979.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L2_059_382G1_scaffold_2487_7
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3286..4167)
DNA (882bp) protein (294aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=E9RWL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD63432.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
ROK family protein
L2_059_382G1_scaffold_2487_8
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4352..4717
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R5YVS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV17144.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
hypothetical protein
L2_059_382G1_scaffold_2487_9
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4788..5708)
DNA (921bp) protein (307aa)
N-acetylneuraminate lyase n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MJ67_9FIRM
N-acetylneuraminate lyase {ECO:0000313|EMBL:EOS70843.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
nanA; N-acetylneuraminate lyase
L2_059_382G1_scaffold_2487_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5736..6446)
DNA (711bp) protein (237aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Putative N-acetylmannosamine-6-phosphate epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=4 Tax=Clostridium bolteae RepID=A8RP70_9CLOT
L2_059_382G1_scaffold_2487_11
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6462..7439)
DNA (978bp) protein (326aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5INQ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI56932.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
oligopeptide ABC transporter ATP-binding protein
L2_059_382G1_scaffold_2487_12
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7426..8520)
DNA (1095bp) protein (365aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6S8_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG52975.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
appD; ABC transporter ATP-binding protein
L2_059_382G1_scaffold_2487_13
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8489..9373)
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5INR0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI56934.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
appC; peptide ABC transporter permease
L2_059_382G1_scaffold_2487_14
Bacillus bataviensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9405..9635)
DNA (231bp) protein (77aa)
Peptide ABC transporter permease n=1 Tax=Bacillus bataviensis LMG 21833 RepID=K6D200_9BACI
Peptide ABC transporter permease {ECO:0000313|EMBL:EKN66492.1}; TaxID=1117379 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus bataviensis LMG 21833.;"
oligopeptide transport system permease protein AppB
L2_059_382G1_scaffold_2487_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9610..10152)
DNA (543bp) protein (181aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5INR1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI56935.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
appB; peptide ABC transporter permease
L2_059_382G1_scaffold_2487_16
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10222..11844)
DNA (1623bp) protein (541aa)
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D6T2_9CLOT
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EEG52959.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ABC transporter substrate-binding protein - oligopeptide transport
L2_059_382G1_scaffold_2487_17
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11859..13187)
DNA (1329bp) protein (443aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KKP7_9FIRM
Alpha-L-fucosidase {ECO:0000313|EMBL:EGN48034.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L2_059_382G1_scaffold_2487_18
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13713..13805
DNA (93bp) protein (31aa)
Putative uncharacterized protein n=2 Tax=Lachnospiraceae RepID=F3AZN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG91614.1}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
putative transposase
Displaying 18 items

View Taxonomy