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L2_059_382G1_scaffold_1084

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_1084_1
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..206)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PG23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17426.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_382G1_scaffold_1084_2
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(235..459)
DNA (225bp) protein (75aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1T0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25192.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_1084_3
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(547..1449)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P9M5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17424.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_1084_4
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1552..2211)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NZ60_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17423.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_382G1_scaffold_1084_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2199..2807)
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1S7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25189.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_1084_6
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2782..3861)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PG19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17421.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_382G1_scaffold_1084_7
unknown

Not on your lists

comp(4376..5557)
DNA (1182bp) protein (394aa)

This feature has no annotations

L2_059_382G1_scaffold_1084_8
Lactobacillus ruminis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5579..6484)
DNA (906bp) protein (302aa)
Glucose-6-phosphate isomerase {ECO:0000313|EMBL:KIC04756.1}; TaxID=1402208 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus ruminis DPC 6832.;"
L2_059_382G1_scaffold_1084_9
unknown

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comp(6502..7038)
DNA (537bp) protein (179aa)

This feature has no annotations

L2_059_382G1_scaffold_1084_10
unknown

Not on your lists

comp(7246..7353)
DNA (108bp) protein (36aa)

This feature has no annotations

L2_059_382G1_scaffold_1084_11
unknown

Not on your lists

comp(7540..8544)
DNA (1005bp) protein (335aa)

This feature has no annotations

L2_059_382G1_scaffold_1084_12
unknown

Not on your lists

comp(8538..11963)
DNA (3426bp) protein (1142aa)

This feature has no annotations

L2_059_382G1_scaffold_1084_13
unknown

Not on your lists

comp(11967..12995)
DNA (1029bp) protein (343aa)

This feature has no annotations

L2_059_382G1_scaffold_1084_14
unknown

Not on your lists

comp(13029..13670)
DNA (642bp) protein (214aa)

This feature has no annotations

L2_059_382G1_scaffold_1084_15
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14456..14677)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2P9B4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK47095.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L2_059_382G1_scaffold_1084_16
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14980..15237)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=[Eubacterium] cylindroides T2-87 RepID=D4JD42_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK88114.1}; TaxID=717960 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides T2-87.;"
L2_059_382G1_scaffold_1084_17
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15274..16029)
DNA (756bp) protein (252aa)
Predicted nucleotidyltransferase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1S5_9FIRM
Predicted nucleotidyltransferase
Predicted nucleotidyltransferase {ECO:0000313|EMBL:CBL25187.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_1084_18
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15992..17290)
DNA (1299bp) protein (433aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
RNA-splicing ligase RtcB n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1S2_9FIRM
hypothetical protein
L2_059_382G1_scaffold_1084_19
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17346..18257)
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1S1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25183.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_1084_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18260..19024)
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1S0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25182.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_1084_21
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19063..19329)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1S0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25182.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_1084_22
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19383..20930)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q6V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17672.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_382G1_scaffold_1084_23
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20953..21453)
DNA (501bp) protein (167aa)
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily subfamily IA variant 1 with third motif having Dx(3-4)D or Dx(3-4)E n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PGT1_9FIRM
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily subfamily IA variant 1 with third motif having Dx(3-4)D or Dx(3-4)E {ECO:0000313|EMBL:CDC17671.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
L2_059_382G1_scaffold_1084_24
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21405..22703)
DNA (1299bp) protein (433aa)
Putative efflux protein MATE family n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P2K2_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CDC17670.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
putative efflux protein, MATE family
L2_059_382G1_scaffold_1084_25
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22729..24237)
DNA (1509bp) protein (503aa)
adenosylcobyric acid synthase (glutamine-hydrolysing) (EC:6.3.5.10)
Cobyric acid synthase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PAB9_9FIRM
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_1084_26
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24252..25301)
DNA (1050bp) protein (350aa)
L-threonine O-3-phosphate decarboxylase (EC:4.1.1.81)
L-threonine O-3-phosphate decarboxylase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NZX6_9FIRM
L-threonine O-3-phosphate decarboxylase {ECO:0000313|EMBL:CDC17668.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_1084_27
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25336..25926)
DNA (591bp) protein (197aa)
Sortase and related acyltransferases (EC:2.3.1.-)
Sortase and related acyltransferases n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q6U7_9FIRM
Sortase and related acyltransferases {ECO:0000313|EMBL:CDC17667.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_1084_28
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25914..26906)
DNA (993bp) protein (331aa)
adenosylcobinamide-phosphate synthase (EC:6.3.1.10)
Cobalamin biosynthesis protein CobD n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PGS8_9FIRM
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_1084_29
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26903..27517)
DNA (615bp) protein (205aa)
Fructose-2,6-bisphosphatase (EC:3.1.3.73)
Fructose-2 6-bisphosphatase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P2J7_9FIRM
Fructose-2 6-bisphosphatase {ECO:0000313|EMBL:CDC17665.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_1084_30
unknown

Not on your lists

comp(27541..27621)
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 30 items

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