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L2_059_382G1_scaffold_1135

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_1135_1
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1950)
DNA (1950bp) protein (650aa)
Translation initiation factor IF-2 n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PAU0_9FIRM
bacterial translation initiation factor 2 (bIF-2)
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_1135_2
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2008..2319)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8BK01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD15439.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
ribosomal protein L7Ae/L30e/S12e/Gadd45
L2_059_382G1_scaffold_1135_3
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2312..2584)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P4M5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC15649.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Predicted nucleic-acid-binding protein implicated in transcription termination
L2_059_382G1_scaffold_1135_4
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2605..3801)
DNA (1197bp) protein (399aa)
Transcription termination factor NusA n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NU03_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
transcription termination factor NusA
L2_059_382G1_scaffold_1135_5
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3819..4286)
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NWT4_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_382G1_scaffold_1135_6
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4524..6764)
DNA (2241bp) protein (747aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954, ECO:0000313|EMBL:CBL26492.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit (EC:5.99.1.3)
Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5I0_9FIRM
L2_059_382G1_scaffold_1135_7
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6776..8698)
DNA (1923bp) protein (641aa)
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA topoisomerase IV subunit B {ECO:0000313|EMBL:CBL26491.1}; EC=5.99.1.3 {ECO:0000313|EMBL:CBL26491.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
DNA topoisomerase IV subunit B n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5H9_9FIRM
L2_059_382G1_scaffold_1135_8
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8854..10056)
DNA (1203bp) protein (401aa)
Stage II sporulation protein P (SpoIIP) n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P4L4_9FIRM
Stage II sporulation protein P (SpoIIP) {ECO:0000313|EMBL:CDC15639.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Stage II sporulation protein P (SpoIIP).
L2_059_382G1_scaffold_1135_9
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10087..11076)
DNA (990bp) protein (330aa)
GPR endopeptidase (EC:3.4.24.78)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626, ECO:0000313|EMBL:CBL26489.1};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Germination protease n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5H7_9FIRM
L2_059_382G1_scaffold_1135_10
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


11317..11580
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PAR5_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
30S ribosomal protein S20
L2_059_382G1_scaffold_1135_11
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11876..12895)
DNA (1020bp) protein (340aa)
ketol-acid reductoisomerase (EC:1.1.1.86)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Ketol-acid reductoisomerase n=2 Tax=Clostridiales RepID=D4M5H6_9FIRM
L2_059_382G1_scaffold_1135_12
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13040..13537)
DNA (498bp) protein (166aa)
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:CBL26486.1}; EC=2.2.1.6 {ECO:0000313|EMBL:CBL26486.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Acetolactate synthase, small subunit n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5H4_9FIRM
L2_059_382G1_scaffold_1135_13
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13704..15524)
DNA (1821bp) protein (607aa)
ABC transporter, ATP-binding protein n=2 Tax=Ruminococcus lactaris RepID=B5CQL4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDY32441.1}; TaxID=471875 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris ATCC 29176.;"
ATPase components of ABC transporters with duplicated ATPase domains
L2_059_382G1_scaffold_1135_14
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15684..16610
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NTX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC15618.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_382G1_scaffold_1135_15
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16720..17055)
DNA (336bp) protein (112aa)
Thermophilic glucose-6-phosphate isomerase and related metalloenzymes n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5H2_9FIRM
Thermophilic glucose-6-phosphate isomerase and related metalloenzymes
Thermophilic glucose-6-phosphate isomerase and related metalloenzymes {ECO:0000313|EMBL:CBL26484.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_1135_16
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17129..18259)
DNA (1131bp) protein (377aa)
Uncharacterized Fe-S center protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PAP8_9FIRM
Uncharacterized Fe-S center protein {ECO:0000313|EMBL:CDC15616.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Uncharacterized Fe-S center protein
L2_059_382G1_scaffold_1135_17
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18450..19721
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NWQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC15615.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_382G1_scaffold_1135_18
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19883..20485
DNA (603bp) protein (201aa)
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily n=1 Tax=Ruminococcus torques L2-14 RepID=D4M5G9_9FIRM
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily {ECO:0000313|EMBL:CBL26481.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Displaying 18 items

View Taxonomy