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L2_059_382G1_scaffold_1172

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_1172_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..196
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1K2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25114.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_1172_2
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

270..965
DNA (696bp) protein (232aa)
exonuclease, DNA polymerase III, epsilon subunit family (EC:2.7.7.7)
Exonuclease DNA polymerase III epsilon subunit family n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P1Y3_9FIRM
Exonuclease DNA polymerase III epsilon subunit family {ECO:0000313|EMBL:CDC14704.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_1172_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(962..1225)
DNA (264bp) protein (88aa)
Phosphopantetheine attachment site. (EC:6.1.1.13)
Phosphopantetheine attachment site {ECO:0000313|EMBL:CBL25112.1}; EC=6.1.1.13 {ECO:0000313|EMBL:CBL25112.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Phosphopantetheine attachment site n=2 Tax=Clostridiales RepID=D4M1K0_9FIRM
L2_059_382G1_scaffold_1172_4
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1256..2482)
DNA (1227bp) protein (409aa)
Diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CBL25111.1}; EC=4.1.1.20 {ECO:0000313|EMBL:CBL25111.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Diaminopimelate decarboxylase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1J9_9FIRM
L2_059_382G1_scaffold_1172_5
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2540..4084)
DNA (1545bp) protein (515aa)
Amino acid adenylation domain n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P820_9FIRM
Amino acid adenylation domain {ECO:0000313|EMBL:CDC14696.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
amino acid adenylation domain
L2_059_382G1_scaffold_1172_6
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4081..5070)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P1X7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC14694.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_382G1_scaffold_1172_7
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5081..6667)
DNA (1587bp) protein (529aa)
Predicted membrane protein involved in D-alanine export n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P816_9FIRM
Predicted membrane protein involved in D-alanine export {ECO:0000313|EMBL:CDC14691.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Predicted membrane protein involved in D-alanine export
L2_059_382G1_scaffold_1172_8
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6918..7454
DNA (537bp) protein (179aa)
Predicted membrane protein n=2 Tax=Clostridiales RepID=D4M1J5_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL25107.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_1172_9
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7915..9288)
DNA (1374bp) protein (458aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1J4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25106.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_1172_10
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9768..10430
DNA (663bp) protein (221aa)
Lysophospholipase L1 and related esterases n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P1W3_9FIRM
Lysophospholipase L1 and related esterases {ECO:0000313|EMBL:CDC14679.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Lysophospholipase L1 and related esterases
L2_059_382G1_scaffold_1172_11
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10566..11906
DNA (1341bp) protein (447aa)
Transporter n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NR69_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Na+-dependent transporters of the SNF family
L2_059_382G1_scaffold_1172_12
unknown

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12088..12225
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:146 RepID=R5G8J9_9FIRM
hypothetical protein
L2_059_382G1_scaffold_1172_13
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12311..13054)
DNA (744bp) protein (248aa)
Uncharacterized protein, putative amidase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1J1_9FIRM
Uncharacterized protein, putative amidase
Uncharacterized protein, putative amidase {ECO:0000313|EMBL:CBL25103.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_1172_14
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13065..13895)
DNA (831bp) protein (277aa)
Carbohydrate ABC transporter membrane protein 2 CUT1 family (TC 3.A.1.1.-) n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P807_9FIRM
Carbohydrate ABC transporter membrane protein 2 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDC14676.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
L2_059_382G1_scaffold_1172_15
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13895..14737)
DNA (843bp) protein (281aa)
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NTW8_9FIRM
Carbohydrate ABC transporter membrane protein 1 CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDC14675.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L2_059_382G1_scaffold_1172_16
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14934..16289)
DNA (1356bp) protein (452aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P1W0_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDC14674.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_059_382G1_scaffold_1172_17
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16308..17321)
DNA (1014bp) protein (338aa)
Transcriptional regulators n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1I7_9FIRM
Transcriptional regulators
Transcriptional regulators {ECO:0000313|EMBL:CBL25099.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_1172_18
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17950..19191)
DNA (1242bp) protein (414aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Signal transduction histidine kinase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1I5_9FIRM
Signal transduction histidine kinase
L2_059_382G1_scaffold_1172_19
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19188..19865)
DNA (678bp) protein (226aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P803_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDC14671.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_059_382G1_scaffold_1172_20
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19927..20067
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NTW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC14670.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_382G1_scaffold_1172_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20060..20947
DNA (888bp) protein (296aa)
4Fe-4S binding domain protein n=6 Tax=Clostridiales RepID=A7AYV5_RUMGN
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEA80332.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
putative iron-sulfur-binding membrane protein
L2_059_382G1_scaffold_1172_22
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20989..21729
DNA (741bp) protein (247aa)
Thiol-disulfide isomerase and thioredoxins n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1I3_9FIRM
Thiol-disulfide isomerase and thioredoxins
Thiol-disulfide isomerase and thioredoxins {ECO:0000313|EMBL:CBL25095.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_1172_23
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21879..22547
DNA (669bp) protein (223aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine ammonia-lyase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PGN7_9FIRM
L-serine ammonia-lyase {ECO:0000313|EMBL:CDC17611.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_1172_24
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22571..23440
DNA (870bp) protein (290aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit (EC:4.3.1.17)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:CBL25093.1}; EC=4.3.1.17 {ECO:0000313|EMBL:CBL25093.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1I1_9FIRM
L2_059_382G1_scaffold_1172_25
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23492..24283
DNA (792bp) protein (264aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridiales RepID=D4M1I0_9FIRM
transcriptional regulator, AraC family
Transcriptional regulator AraC family {ECO:0000313|EMBL:CDC17613.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_1172_26
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24309..25496)
DNA (1188bp) protein (396aa)
Uncharacterized oxidoreductases Fe-dependent alcohol dehydrogenase family n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PA81_9FIRM
Uncharacterized oxidoreductases Fe-dependent alcohol dehydrogenase family {ECO:0000313|EMBL:CDC17614.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
L2_059_382G1_scaffold_1172_27
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25499..26788)
DNA (1290bp) protein (430aa)
UPF0597 protein RTO_03140 n=2 Tax=Clostridiales RepID=D4M1H8_9FIRM
hypothetical protein
UPF0597 protein RTO_03140 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_1172_28
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26996..27085)
DNA (90bp) protein (30aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R6PGP1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC17616.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_1172_29
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27119..27208)
DNA (90bp) protein (30aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R6Q6Q7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC17617.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_1172_30
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27732..28667)
DNA (936bp) protein (312aa)
Putative membrane protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UUX4_CLOBO
Putative membrane protein {ECO:0000313|EMBL:CDC17618.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
Displaying items 1-30 of 43 in total

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