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L2_059_382G1_scaffold_1782

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_1782_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(148..807)
DNA (660bp) protein (220aa)
Channel protein, hemolysin III family n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2C5_9FIRM
channel protein, hemolysin III family
Channel protein, hemolysin III family {ECO:0000313|EMBL:CBL25387.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_1782_2
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1060..1989)
DNA (930bp) protein (310aa)
Carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=2 Tax=Clostridiales RepID=D4M2C4_9FIRM
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_1782_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2119..3621)
DNA (1503bp) protein (501aa)
Predicted integral membrane protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2C3_9FIRM
Predicted integral membrane protein
Predicted integral membrane protein {ECO:0000313|EMBL:CBL25385.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_1782_4
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3920..4939
DNA (1020bp) protein (340aa)
Isopentenyldiphosphate isomerase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2C2_9FIRM
Isopentenyldiphosphate isomerase
Isopentenyldiphosphate isomerase {ECO:0000313|EMBL:CBL25384.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_1782_5
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5074..6459)
DNA (1386bp) protein (462aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PA33_9FIRM
L2_059_382G1_scaffold_1782_6
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6459..7511)
DNA (1053bp) protein (351aa)
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
D-alanine--D-alanine ligase n=2 Tax=Clostridiales RepID=D4M2C0_9FIRM
L2_059_382G1_scaffold_1782_7
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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7864..8283
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XIC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA15263.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
L2_059_382G1_scaffold_1782_8
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8374..9522)
DNA (1149bp) protein (383aa)
Sugar diacid utilization regulator n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P9Q2_9FIRM
Sugar diacid utilization regulator {ECO:0000313|EMBL:CDC15296.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Sugar diacid utilization regulator
L2_059_382G1_scaffold_1782_9
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9769..10905
DNA (1137bp) protein (379aa)
glycerate kinase (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P3H2_9FIRM
Glycerate kinase {ECO:0000313|EMBL:CDC15294.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_1782_10
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10892..11527)
DNA (636bp) protein (212aa)
Acetyltransferases n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NSY9_9FIRM
Acetyltransferases {ECO:0000313|EMBL:CDC15293.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Acetyltransferases
L2_059_382G1_scaffold_1782_11
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11524..13128)
DNA (1605bp) protein (535aa)
Peptidase family M28 n=1 Tax=Ruminococcus torques L2-14 RepID=D4M2B7_9FIRM
Peptidase family M28 {ECO:0000313|EMBL:CBL25379.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Peptidase family M28.
L2_059_382G1_scaffold_1782_12
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13528..14442)
DNA (915bp) protein (305aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NSY1_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CDC15288.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Transcriptional regulator
L2_059_382G1_scaffold_1782_13
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14662..16179
DNA (1518bp) protein (506aa)
galactarate dehydratase (EC:4.2.1.42)
Galactarate dehydratase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PZY0_9FIRM
Galactarate dehydratase {ECO:0000313|EMBL:CDC15287.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_1782_14
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16400..17785
DNA (1386bp) protein (462aa)
PAS domain S-box n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NVQ2_9FIRM
PAS domain S-box {ECO:0000313|EMBL:CDC15285.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
PAS domain S-box
Displaying 14 items

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