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L2_059_382G1_scaffold_1885

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_1885_1
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(320..709)
DNA (390bp) protein (130aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=R6U2M3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK79782.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
L2_059_382G1_scaffold_1885_2
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(684..2198)
DNA (1515bp) protein (505aa)
recombinase n=1 Tax=Blautia producta RepID=UPI0003639B9C
Uncharacterized protein {ECO:0000313|EMBL:CDB19018.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
Site-specific recombinase XerD
L2_059_382G1_scaffold_1885_3
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2188..4155)
DNA (1968bp) protein (656aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WP29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX77028.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Site-specific recombinase XerD
L2_059_382G1_scaffold_1885_4
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4169..5287)
DNA (1119bp) protein (373aa)
recombinase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI00030BCAD1
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDM64374.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
Site-specific recombinase XerD
L2_059_382G1_scaffold_1885_5
Bacillus sp. 17376, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5487..6113
DNA (627bp) protein (209aa)
XRE family transcriptional regulator n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B38AD7
Uncharacterized protein {ECO:0000313|EMBL:ESU34266.1}; TaxID=977905 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. 17376.;"
L2_059_382G1_scaffold_1885_6
unknown

Not on your lists

6174..6650
DNA (477bp) protein (159aa)

This feature has no annotations

L2_059_382G1_scaffold_1885_7
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6687..7940
DNA (1254bp) protein (418aa)
Transposase, Mutator family n=6 Tax=root RepID=A8SQP2_9FIRM
Transposase, Mutator family {ECO:0000313|EMBL:EDP27029.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
transposase mutator type
L2_059_382G1_scaffold_1885_8
Acetobacter malorum, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8179..9267)
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Methylobacter sp. UW 659-2-H10 RepID=UPI00036AC1A5
Uncharacterized protein {ECO:0000313|EMBL:KFL88204.1}; TaxID=178901 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter malorum.;"
TIR domain protein
L2_059_382G1_scaffold_1885_9
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9329..10273)
DNA (945bp) protein (315aa)
Tyrosine recombinase XerC n=1 Tax=Ruminococcus torques L2-14 RepID=D4M6J7_9FIRM
Site-specific recombinase XerD
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_1885_10
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10523..10843)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2P176_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK44195.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L2_059_382G1_scaffold_1885_11
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10919..11104)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2QSB3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK44193.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L2_059_382G1_scaffold_1885_12
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11150..11464)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MN67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72111.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
L2_059_382G1_scaffold_1885_13
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11486..12316)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K1P8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40161.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L2_059_382G1_scaffold_1885_14
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12376..12672)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K1P8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40161.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L2_059_382G1_scaffold_1885_15
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12697..12894)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K9N1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40162.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L2_059_382G1_scaffold_1885_16
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12988..13419)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K157_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40164.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L2_059_382G1_scaffold_1885_17
unknown

Not on your lists

comp(13434..13760)
DNA (327bp) protein (109aa)

This feature has no annotations

L2_059_382G1_scaffold_1885_18
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13777..15948)
DNA (2172bp) protein (724aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MLW7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72119.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L2_059_382G1_scaffold_1885_19
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15945..16502)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K9N6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40167.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L2_059_382G1_scaffold_1885_20
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16525..17232)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K1D9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40168.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L2_059_382G1_scaffold_1885_21
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17286..17699)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MWC9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS72122.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L2_059_382G1_scaffold_1885_22
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17714..18343)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K142_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40170.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L2_059_382G1_scaffold_1885_23
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18327..18641)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K1Q8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40171.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L2_059_382G1_scaffold_1885_24
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18655..19704)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PJ68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK44196.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L2_059_382G1_scaffold_1885_25
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19706..19969)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K1E4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40173.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L2_059_382G1_scaffold_1885_26
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19980..20426)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K168_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40174.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L2_059_382G1_scaffold_1885_27
unknown

Not on your lists

comp(20987..21226)
DNA (240bp) protein (80aa)

This feature has no annotations

L2_059_382G1_scaffold_1885_28

Not on your lists

comp(21538..23400)
DNA (1863bp) protein (621aa)
Putative uncharacterized protein n=1 Tax=uncultured organism RepID=D9ZF22_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADD61926.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
ABC transporter permease
L2_059_382G1_scaffold_1885_29
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23436..24098)
DNA (663bp) protein (221aa)
ABC-type antimicrobial peptide transport system, ATPase component n=11 Tax=root RepID=D4JD88_9FIRM
macrolide export ATP-binding/permease MacB
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBL10669.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_059_382G1_scaffold_1885_30
unknown

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comp(24382..24540)
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying 30 items

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