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L2_059_382G1_scaffold_872

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Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_872_1
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..153)
DNA (153bp) protein (51aa)
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1D4_9FIRM
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CBL25046.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_872_2
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

612..1004
DNA (393bp) protein (131aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L-aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q6S3_9FIRM
L2_059_382G1_scaffold_872_3
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1099..1938
DNA (840bp) protein (280aa)
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000313|EMBL:CBL25044.1}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000313|EMBL:CBL25044.1};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Pantothenate synthetase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1D2_9FIRM
L2_059_382G1_scaffold_872_4
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1942..2916
DNA (975bp) protein (325aa)
Predicted Na+-dependent transporter n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1D1_9FIRM
Predicted Na+-dependent transporter
Predicted Na+-dependent transporter {ECO:0000313|EMBL:CBL25043.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_872_5
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2975..5032)
DNA (2058bp) protein (686aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1D0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CBL25042.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
hypothetical protein
L2_059_382G1_scaffold_872_6
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5455..6330)
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1C9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL25041.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_872_7
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6353..7642)
DNA (1290bp) protein (430aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Seryl-tRNA synthetase {ECO:0000313|EMBL:CBL25040.1}; EC=6.1.1.11 {ECO:0000313|EMBL:CBL25040.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Seryl-tRNA synthetase n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1C8_9FIRM
L2_059_382G1_scaffold_872_8
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7681..8184)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NVV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC16273.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_382G1_scaffold_872_9
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8201..9121)
DNA (921bp) protein (307aa)
ParB-like partition proteins n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P6H3_9FIRM
ParB-like partition proteins {ECO:0000313|EMBL:CDC16274.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ParB-like partition proteins
L2_059_382G1_scaffold_872_10
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9124..9894)
DNA (771bp) protein (257aa)
ATPases involved in chromosome partitioning n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NYL7_9FIRM
ATPases involved in chromosome partitioning {ECO:0000313|EMBL:CDC16275.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
ATPases involved in chromosome partitioning
L2_059_382G1_scaffold_872_11
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10293..11261
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NZ25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17388.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_382G1_scaffold_872_12
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11511..12236)
DNA (726bp) protein (242aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
16S rRNA m(7)G-527 methyltransferase (EC:2.1.1.- 2.1.-.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q614_9FIRM
L2_059_382G1_scaffold_872_13
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12351..14243)
DNA (1893bp) protein (631aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1C5_9FIRM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
glucose-inhibited division protein A
L2_059_382G1_scaffold_872_14
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14209..15597)
DNA (1389bp) protein (463aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
tRNA modification GTPase MnmE n=2 Tax=Clostridiales RepID=D4M1C4_9FIRM
tRNA modification GTPase trmE
L2_059_382G1_scaffold_872_15
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15733..16560)
DNA (828bp) protein (276aa)
Predicted RNA-binding protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P9I7_9FIRM
Predicted RNA-binding protein {ECO:0000313|EMBL:CDC17384.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Predicted RNA-binding protein
L2_059_382G1_scaffold_872_16
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16636..17970)
DNA (1335bp) protein (445aa)
Membrane protein insertase, YidC/Oxa1 family, C-terminal domain n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1C2_9FIRM
membrane protein insertase, YidC/Oxa1 family, C-terminal domain
Membrane protein insertase, YidC/Oxa1 family, C-terminal domain {ECO:0000313|EMBL:CBL25034.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_872_17
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17983..18195)
DNA (213bp) protein (71aa)
Putative membrane protein insertion efficiency factor n=2 Tax=Clostridiales RepID=D4M1C1_9FIRM
conserved hypothetical protein TIGR00278
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_872_18
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18223..18558)
DNA (336bp) protein (112aa)
ribonuclease P protein component (EC:3.1.26.5)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Ribonuclease P protein component n=2 Tax=Clostridiales RepID=D4M1C0_9FIRM
L2_059_382G1_scaffold_872_19
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19472..20842
DNA (1371bp) protein (457aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P9I1_9FIRM
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
chromosomal replication initiator protein DnaA
L2_059_382G1_scaffold_872_20
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21198..22307
DNA (1110bp) protein (370aa)
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
DNA polymerase III subunit beta n=2 Tax=Clostridiales RepID=D4M1B7_9FIRM
L2_059_382G1_scaffold_872_21
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22465..22680
DNA (216bp) protein (72aa)
Uncharacterized conserved protein n=2 Tax=Clostridiales RepID=D4M1B6_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CDC17377.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_872_22
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22750..23841
DNA (1092bp) protein (364aa)
DNA replication and repair protein RecF n=2 Tax=Clostridiales RepID=D4M1B5_9FIRM
recF protein
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_872_23
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23853..25787
DNA (1935bp) protein (645aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=2 Tax=Clostridiales RepID=D4M1B4_9FIRM
L2_059_382G1_scaffold_872_24
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


26007..28526
DNA (2520bp) protein (840aa)
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897, ECO:0000313|EMBL:CBL25025.1}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897, ECO:0000313|EMBL:CBL25025.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
DNA gyrase subunit A n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1B3_9FIRM
L2_059_382G1_scaffold_872_25
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28998..29741
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1B1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC14322.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L2_059_382G1_scaffold_872_26
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29943..31157
DNA (1215bp) protein (405aa)
Flp pilus assembly protein, ATPase CpaF n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1B0_9FIRM
Flp pilus assembly protein, ATPase CpaF
Flp pilus assembly protein, ATPase CpaF {ECO:0000313|EMBL:CBL25022.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_872_27
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31105..31860
DNA (756bp) protein (252aa)
Flp pilus assembly protein TadB n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1A9_9FIRM
Flp pilus assembly protein TadB
Flp pilus assembly protein TadB {ECO:0000313|EMBL:CBL25021.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_059_382G1_scaffold_872_28
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31850..32293
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NZP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17578.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L2_059_382G1_scaffold_872_29
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32296..32907
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6NZP8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17578.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
Bacterial type II secretion system protein F domain.
L2_059_382G1_scaffold_872_30
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32939..33118
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6Q6M4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17577.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
Displaying items 1-30 of 45 in total

View Taxonomy