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L2_059_382G1_scaffold_2517

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_2517_1
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(3..263)
DNA (261bp) protein (87aa)
Uncharacterized flavoproteins n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EYU6_9FIRM
Uncharacterized flavoproteins {ECO:0000313|EMBL:CDB01956.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
flavoprotein
L2_059_382G1_scaffold_2517_2
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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comp(281..2206)
DNA (1926bp) protein (642aa)
Rubredoxin n=1 Tax=Fusobacterium mortiferum ATCC 9817 RepID=C3WAK1_FUSMR
Rubredoxin {ECO:0000313|EMBL:EEO34888.1}; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium mortiferum ATCC 9817.;"
acyl-CoA dehydrogenase
L2_059_382G1_scaffold_2517_3
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(2387..2689)
DNA (303bp) protein (101aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EXU9_9FIRM
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:CDB01954.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
transcriptional regulatory protein
L2_059_382G1_scaffold_2517_4
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(2854..4125)
DNA (1272bp) protein (424aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EMX1_9FIRM
L2_059_382G1_scaffold_2517_5
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(4160..6076)
DNA (1917bp) protein (639aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FIS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01952.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
glutamine synthetase
L2_059_382G1_scaffold_2517_6
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(6189..9092)
DNA (2904bp) protein (968aa)
UPF0182 protein BN497_01385 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EYU0_9FIRM
UPF0182 protein BN497_01385 {ECO:0000256|HAMAP-Rule:MF_01600}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
conserved membrane protein of unknown function
L2_059_382G1_scaffold_2517_7
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(9092..11128)
DNA (2037bp) protein (679aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EPW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01950.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L2_059_382G1_scaffold_2517_8
unknown

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comp(11144..12139)
DNA (996bp) protein (332aa)

This feature has no annotations

L2_059_382G1_scaffold_2517_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12161..13546)
DNA (1386bp) protein (462aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9WUJ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13292.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Predicted ATPase (AAA+ superfamily)
L2_059_382G1_scaffold_2517_10
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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14083..14955
DNA (873bp) protein (291aa)
dan; D-aminoacylase (EC:3.5.1.81)
Amidohydrolase family protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y8L0_9FIRM
Amidohydrolase family protein {ECO:0000313|EMBL:EEF67698.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L2_059_382G1_scaffold_2517_11
Firmicutes bacterium CAG:534, Firmicutes, Bacteria

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15022..16455
DNA (1434bp) protein (478aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1263027 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:534.;"
Aspartyl aminopeptidase (EC:3.4.11.-)
M18 family aminopeptidase n=1 Tax=Firmicutes bacterium CAG:534 RepID=R6ZCB3_9FIRM
L2_059_382G1_scaffold_2517_12
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16583..17167
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Blautia hydrogenotrophica DSM 10507 RepID=C0CJQ6_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEG49996.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
adenylyl cyclase CyaB
L2_059_382G1_scaffold_2517_13
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

17303..17656
DNA (354bp) protein (118aa)
Protein from nitrogen regulatory protein P-II (GLNB) n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HCP6_9FIRM
Protein from nitrogen regulatory protein P-II (GLNB) {ECO:0000313|EMBL:CCY27475.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L2_059_382G1_scaffold_2517_14
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17754..18134)
DNA (381bp) protein (127aa)
Iron (Metal) dependent repressor, DtxR family n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R0I5_CLOSW
Iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:EXG83756.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
DtxR family iron (metal) dependent repressor
L2_059_382G1_scaffold_2517_15
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18645..19460)
DNA (816bp) protein (272aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
purine nucleoside phosphorylase I (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K066_9FIRM
L2_059_382G1_scaffold_2517_16
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(19512..19835)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EMV3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB01938.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
SPFH domain/band 7 family protein
Displaying 16 items

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