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L2_059_382G1_scaffold_254

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_254_1
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(1..1005)
DNA (1005bp) protein (335aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
alaS; alanyl-tRNA synthetase AlaS (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ER55_9FIRM
L2_059_382G1_scaffold_254_2
Lachnoanaerobaculum sp. MSX33, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1267..2601)
DNA (1335bp) protein (445aa)
Glutamate dehydrogenase n=4 Tax=Clostridium bolteae RepID=A8S385_9CLOT
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=936596 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum sp. MSX33.;"
Glu/Leu/Phe/Val dehydrogenase
L2_059_382G1_scaffold_254_3
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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comp(2799..3857)
DNA (1059bp) protein (353aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E1S6_9FIRM
L2_059_382G1_scaffold_254_4
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(3838..4284)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FK28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02417.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
NifU domain-containing protein
L2_059_382G1_scaffold_254_5
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(4290..5459)
DNA (1170bp) protein (390aa)
iscS2; Cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase NifS n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F050_9FIRM
Cysteine desulfurase NifS {ECO:0000313|EMBL:CDB02416.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L2_059_382G1_scaffold_254_6
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(5527..5964)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ER49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02415.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L2_059_382G1_scaffold_254_7
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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comp(6225..6473)
DNA (249bp) protein (83aa)
UPF0291 protein BN553_01494 n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DSG1_9FIRM
UPF0291 protein BN553_01494 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
hypothetical protein
L2_059_382G1_scaffold_254_8
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(6633..7448)
DNA (816bp) protein (272aa)
Sporulation transcriptional activator Spo0A n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EP96_9FIRM
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
spo0A; stage 0 sporulation protein A
L2_059_382G1_scaffold_254_9
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(7596..8660)
DNA (1065bp) protein (355aa)
spoIVB; peptidase (EC:3.4.21.116)
Peptidase S55 sporulation stage IV protein B n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FK23_9FIRM
Peptidase S55 sporulation stage IV protein B {ECO:0000313|EMBL:CDB02412.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L2_059_382G1_scaffold_254_10
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(8670..9209)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F044_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02411.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L2_059_382G1_scaffold_254_11
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(9298..10014)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ER45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02410.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
comEA; DNA uptake protein
L2_059_382G1_scaffold_254_12
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(10069..10749)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZ22_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02409.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L2_059_382G1_scaffold_254_13
[Eubacterium] nodatum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11163..12950)
DNA (1788bp) protein (596aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PLJ4_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:ETJ99263.1}; TaxID=1161902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium nodatum ATCC 33099.;"
radical SAM protein
L2_059_382G1_scaffold_254_14
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(13899..14411)
DNA (513bp) protein (171aa)
Peptidase M23 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F041_9FIRM
Peptidase M23 {ECO:0000313|EMBL:CDB02406.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
peptidase M23
L2_059_382G1_scaffold_254_15
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(14750..16048)
DNA (1299bp) protein (433aa)
GTPase Obg n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ER40_9FIRM
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
obg; GTPase Obg
L2_059_382G1_scaffold_254_16
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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comp(16127..16387)
DNA (261bp) protein (87aa)
50S ribosomal protein L27 n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DSE9_9FIRM
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
rpmA; 50S ribosomal protein L27
L2_059_382G1_scaffold_254_17
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists


comp(16416..16961)
DNA (546bp) protein (182aa)
50S ribosomal protein L21 n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DPR2_9FIRM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
ribosomal protein L21P
L2_059_382G1_scaffold_254_18
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists


comp(17244..18374)
DNA (1131bp) protein (377aa)
Protein RecA n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EP80_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
protein RecA
L2_059_382G1_scaffold_254_19
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(18823..21342)
DNA (2520bp) protein (840aa)
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Copper-(Or silver)-translocating P-type ATPase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FJL0_9FIRM
Copper-(Or silver)-translocating P-type ATPase {ECO:0000313|EMBL:CDB02247.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L2_059_382G1_scaffold_254_20
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(21430..21738)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IBE6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB43829.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein
L2_059_382G1_scaffold_254_21
unknown

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comp(22012..22215)
DNA (204bp) protein (68aa)

This feature has no annotations

L2_059_382G1_scaffold_254_22
unknown

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comp(22203..22538)
DNA (336bp) protein (112aa)

This feature has no annotations

L2_059_382G1_scaffold_254_23
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(22768..23997)
DNA (1230bp) protein (410aa)
Putative competence-damage inducible protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FK07_9FIRM
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
competence/damage-inducible protein CinA-like protein
L2_059_382G1_scaffold_254_24
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(24059..24589)
DNA (531bp) protein (177aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F031_9FIRM
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:CDB02396.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L2_059_382G1_scaffold_254_25
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(24589..25968)
DNA (1380bp) protein (460aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
SSU ribosomal protein S12P methylthiotransferase (EC:1.3.1.74 2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ER28_9FIRM
L2_059_382G1_scaffold_254_26
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(25972..28671)
DNA (2700bp) protein (900aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZ06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02394.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
DNA translocase FtsK
L2_059_382G1_scaffold_254_27
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(28729..29562)
DNA (834bp) protein (278aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
putative undecaprenol kinase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EP73_9FIRM
L2_059_382G1_scaffold_254_28
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(29575..30666)
DNA (1092bp) protein (364aa)
aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FK01_9FIRM
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:CDB02392.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L2_059_382G1_scaffold_254_29
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

30815..31696
DNA (882bp) protein (294aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F024_9FIRM
L2_059_382G1_scaffold_254_30
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32009..33841)
DNA (1833bp) protein (611aa)
Uncharacterized protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VQR5_CLOSH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC68736.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM; 8532 / NCIMB 11754).;"
Displaying items 1-30 of 73 in total

View Taxonomy