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L2_059_382G1_scaffold_313

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_313_1
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(12..1406)
DNA (1395bp) protein (465aa)
ATPase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FK82_9FIRM
ATPase {ECO:0000313|EMBL:CDB02467.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L2_059_382G1_scaffold_313_2
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(1410..2483)
DNA (1074bp) protein (358aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
3-isopropylmalate dehydrogenase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6PRX7_9FIRM
L2_059_382G1_scaffold_313_3
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(2541..3752)
DNA (1212bp) protein (404aa)
threonine dehydratase, medium form (EC:4.3.1.19)
Threonine dehydratase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZ94_9FIRM
Threonine dehydratase {ECO:0000313|EMBL:CDB02469.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
L2_059_382G1_scaffold_313_4
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(3773..4252)
DNA (480bp) protein (160aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
3-isopropylmalate dehydratase small subunit n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERB3_9FIRM
3-isopropylmalate dehydratase small subunit
L2_059_382G1_scaffold_313_5
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(4253..5515)
DNA (1263bp) protein (421aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0A7_9FIRM
L2_059_382G1_scaffold_313_6
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(5529..7319)
DNA (1791bp) protein (597aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Isopropylmalate/homocitrate/citramalate synthases (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FK86_9FIRM
L2_059_382G1_scaffold_313_7
unknown

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comp(7764..7967)
DNA (204bp) protein (68aa)

This feature has no annotations

L2_059_382G1_scaffold_313_8
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

8095..9624
DNA (1530bp) protein (510aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LIM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41893.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L2_059_382G1_scaffold_313_9
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

9624..10295
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IYS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41891.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L2_059_382G1_scaffold_313_10
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(10357..10506)
DNA (150bp) protein (50aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Aspartate 1-decarboxylase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZK5_9FIRM
hypothetical protein
L2_059_382G1_scaffold_313_11
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(10531..11379)
DNA (849bp) protein (283aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247610}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Pantothenate synthetase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FJI5_9FIRM
pantoate--beta-alanine ligase
L2_059_382G1_scaffold_313_12
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(11391..12218)
DNA (828bp) protein (276aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ENP8_9FIRM
L2_059_382G1_scaffold_313_13
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(12265..13197)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EYK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02224.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L2_059_382G1_scaffold_313_14
unknown

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comp(13369..13611)
DNA (243bp) protein (81aa)

This feature has no annotations

L2_059_382G1_scaffold_313_15
unknown

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comp(13617..13877)
DNA (261bp) protein (87aa)
bltD; spermine/spermidine acetyltransferase (EC:2.3.1.57)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI0003761B5A
L2_059_382G1_scaffold_313_16
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

14109..14627
DNA (519bp) protein (173aa)
CHAP domain n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EQ02_9FIRM
CHAP domain {ECO:0000313|EMBL:CDB02678.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
CHAP domain.
L2_059_382G1_scaffold_313_17
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(14966..15277)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FKT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02677.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L2_059_382G1_scaffold_313_18
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(15324..16610)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0W2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02676.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
DNA repair protein
L2_059_382G1_scaffold_313_19
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16788..17354)
DNA (567bp) protein (189aa)
Pilin isopeptide linkage domain protein n=1 Tax=Ruminococcus albus 8 RepID=E9SH08_RUMAL
Pilin isopeptide linkage domain protein {ECO:0000313|EMBL:EXM40747.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
type IV secretion protein Rhs
L2_059_382G1_scaffold_313_20

Not on your lists

comp(17344..18165)
DNA (822bp) protein (274aa)
Uncharacterized protein (Fragment) n=1 Tax=gut metagenome RepID=J9GAM4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EJX04352.1}; Flags: Fragment;; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
L2_059_382G1_scaffold_313_21
unknown

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comp(18137..19447)
DNA (1311bp) protein (437aa)

This feature has no annotations

L2_059_382G1_scaffold_313_22
Eggerthella sp. CAG:298, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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comp(19657..20046)
DNA (390bp) protein (130aa)
Fibro-slime domain protein n=1 Tax=Eggerthella sp. CAG:298 RepID=R7AMM4_9ACTN
Fibro-slime domain protein {ECO:0000313|EMBL:CDD59620.1}; TaxID=1262876 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:298.;"
hypothetical protein
L2_059_382G1_scaffold_313_23
unknown

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comp(20022..20759)
DNA (738bp) protein (246aa)

This feature has no annotations

L2_059_382G1_scaffold_313_24
unknown

Not on your lists

comp(21104..21307)
DNA (204bp) protein (68aa)

This feature has no annotations

L2_059_382G1_scaffold_313_25
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21403..21663)
DNA (261bp) protein (87aa)
Prevent-host-death family protein {ECO:0000313|EMBL:CEO89846.1}; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Syntrophaceticus.;" source="Syntrophaceticus schinkii.;"
Phd_YefM id=2019627 bin=GWB2_Clostridiales_37_7 species=Desulfosporosinus youngiae genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
prevent-host-death family protein
L2_059_382G1_scaffold_313_26
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(21926..22840)
DNA (915bp) protein (305aa)
Elongation factor Ts n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FKZ6_9FIRM
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
tsf; elongation factor Ts
L2_059_382G1_scaffold_313_27
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists


comp(22874..23668)
DNA (795bp) protein (265aa)
30S ribosomal protein S2 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F131_9FIRM
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
rpsB; 30S ribosomal protein S2
L2_059_382G1_scaffold_313_28
[Eubacterium] infirmum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24019..25320)
DNA (1302bp) protein (434aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=883109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium infirmum F0142.;"
Diaminopimelate decarboxylase n=1 Tax=Eubacterium infirmum F0142 RepID=H1PL31_9FIRM
diaminopimelate decarboxylase
L2_059_382G1_scaffold_313_29
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25391..26275)
DNA (885bp) protein (295aa)
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
Diaminopimelate epimerase n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KW12_OSCVS
L2_059_382G1_scaffold_313_30
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26372..27292)
DNA (921bp) protein (307aa)
Putative uncharacterized protein n=1 Tax=Eubacterium infirmum F0142 RepID=H1PM34_9FIRM
LD-carboxypeptidase {ECO:0000313|EMBL:EUC77808.1}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium sulci ATCC 35585.;"
peptidase U61 LD-carboxypeptidase A
Displaying items 1-30 of 98 in total

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