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L2_059_382G1_scaffold_665

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Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_665_1
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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284..631
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9J1Q8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS25122.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
NADPH-dependent FMN reductase
L2_059_382G1_scaffold_665_2
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(699..2063)
DNA (1365bp) protein (455aa)
Na+/H+ antiporter NhaC n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ETK2_9FIRM
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:CDB03255.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
nhaC; sodium/proton antiporter NhaC
L2_059_382G1_scaffold_665_3
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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comp(2247..3521)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ES12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02700.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L2_059_382G1_scaffold_665_4
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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3825..4532
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K3N6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40963.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
conserved hypothetical protein TIGR00104
L2_059_382G1_scaffold_665_5
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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4566..5054
DNA (489bp) protein (163aa)
Conserved domain protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EQ20_9FIRM
Conserved domain protein {ECO:0000313|EMBL:CDB02703.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
bacterial PH domain protein
L2_059_382G1_scaffold_665_6
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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5047..6582
DNA (1536bp) protein (512aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02704.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
bacterial PH domain protein
L2_059_382G1_scaffold_665_7
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

6579..6956
DNA (378bp) protein (126aa)
Translation initiation inhibitor n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ES14_9FIRM
Translation initiation inhibitor {ECO:0000313|EMBL:CDB02705.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
translation initiation inhibitor
L2_059_382G1_scaffold_665_8
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

7241..8995
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0Z2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB02706.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
putative ABC transporter permease/ATP-binding protein
L2_059_382G1_scaffold_665_9
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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10153..10857
DNA (705bp) protein (235aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
Uridylate kinase n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DYH7_9FIRM
pyrH; uridylate kinase
L2_059_382G1_scaffold_665_10
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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11288..11842
DNA (555bp) protein (185aa)
Ribosome-recycling factor n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E7N4_9FIRM
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
ribosome recycling factor
L2_059_382G1_scaffold_665_11
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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11917..12621
DNA (705bp) protein (235aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
uppS; isoprenyl transferase UppS (EC:2.5.1.-)
Isoprenyl transferase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZX9_9FIRM
L2_059_382G1_scaffold_665_12
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

12725..13510
DNA (786bp) protein (262aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Phosphatidate cytidylyltransferase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ES19_9FIRM
phosphatidate cytidylyltransferase
L2_059_382G1_scaffold_665_13
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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13533..14705
DNA (1173bp) protein (391aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0Z7_9FIRM
L2_059_382G1_scaffold_665_14
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

14827..15831
DNA (1005bp) protein (335aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
RIP metalloprotease RseP n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FKW7_9FIRM
membrane-associated zinc metalloprotease
L2_059_382G1_scaffold_665_15
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

15878..16960
DNA (1083bp) protein (361aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184189}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EQ26_9FIRM
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
L2_059_382G1_scaffold_665_16
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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17010..20861
DNA (3852bp) protein (1284aa)
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
DNA polymerase-3 alpha subunit (EC:2.7.7.7)
DNA polymerase III polC-type n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EZY4_9FIRM
L2_059_382G1_scaffold_665_17
Clostridium sp. CAG:306, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21017..22345
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:306 RepID=R6PM54_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC21939.1}; TaxID=1262794 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:306.;"
Na+/H+ antiporter
L2_059_382G1_scaffold_665_18
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22392..23099
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI00035E1860
Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
4Fe-4S binding domain protein {ECO:0000313|EMBL:EFE11769.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L2_059_382G1_scaffold_665_19
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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23101..23787
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI0003616F50
Ferredoxin {ECO:0000313|EMBL:AKB85089.1}; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens MM1.;"
hypothetical protein
L2_059_382G1_scaffold_665_20
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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24018..24497
DNA (480bp) protein (160aa)
Ribosome maturation factor RimP n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F1Z1_9FIRM
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L2_059_382G1_scaffold_665_21
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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24516..25745
DNA (1230bp) protein (410aa)
Transcription termination factor NusA n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EU43_9FIRM
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
NusA antitermination factor
L2_059_382G1_scaffold_665_22
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

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25764..26060
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6ELC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA90782.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
hypothetical protein
L2_059_382G1_scaffold_665_23
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

26057..26371
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FN25_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03452.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
ribosomal protein L7Ae/L30e/S12e/Gadd45
L2_059_382G1_scaffold_665_24
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

26386..29172
DNA (2787bp) protein (929aa)
Translation initiation factor IF-2 n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ES54_9FIRM
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
translation initiation factor IF-2
L2_059_382G1_scaffold_665_25
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

29208..29621
DNA (414bp) protein (138aa)
Ribosome-binding factor A n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F1Z6_9FIRM
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
ribosome-binding factor A
L2_059_382G1_scaffold_665_26
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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29611..30588
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EU50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03455.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
exopolyphosphatase-like protein
L2_059_382G1_scaffold_665_27
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

30591..31592
DNA (1002bp) protein (334aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
tRNA pseudouridine synthase B n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F398_9FIRM
truB; tRNA pseudouridine synthase B
L2_059_382G1_scaffold_665_28
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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31599..32522
DNA (924bp) protein (308aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
ribF; riboflavin biosynthesis protein RibF (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FN31_9FIRM
L2_059_382G1_scaffold_665_29
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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32992..33222
DNA (231bp) protein (77aa)
Acyl carrier protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FMG2_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
acyl carrier protein
L2_059_382G1_scaffold_665_30
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

33225..33746
DNA (522bp) protein (174aa)
Acetyl-CoA carboxylase biotin carboxyl carrier protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERL3_9FIRM
Acetyl-CoA carboxylase biotin carboxyl carrier protein {ECO:0000313|EMBL:CDB03263.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
Displaying items 1-30 of 46 in total

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