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L2_059_382G1_scaffold_1008

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_1008_1
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..1609)
DNA (1608bp) protein (536aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K6A3W5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10363.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
alpha-L-rhamnosidase
L2_059_382G1_scaffold_1008_2
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1679..4792)
DNA (3114bp) protein (1038aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z473_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10364.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_059_382G1_scaffold_1008_3
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4853..6379)
DNA (1527bp) protein (509aa)
SusD family protein n=3 Tax=Parabacteroides RepID=B7B6G7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10365.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
RagB/SusD domain-containing protein
L2_059_382G1_scaffold_1008_4
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6415..9525)
DNA (3111bp) protein (1037aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Parabacteroides RepID=B7B6G6_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEC97984.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
TonB-dependent receptor plug
L2_059_382G1_scaffold_1008_5
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9940..10434)
DNA (495bp) protein (165aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B6G4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10367.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_059_382G1_scaffold_1008_6
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10439..10852)
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6A3X0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76720.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_059_382G1_scaffold_1008_7
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10830..11348)
DNA (519bp) protein (173aa)
Sigma-70 region 2 n=3 Tax=Parabacteroides RepID=B7B6G2_9PORP
Sigma-70 region 2 {ECO:0000313|EMBL:EEC97980.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
RNA polymerase ECF-type sigma factor
L2_059_382G1_scaffold_1008_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11338..11790)
DNA (453bp) protein (151aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B6G1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10370.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_059_382G1_scaffold_1008_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11914..12816)
DNA (903bp) protein (301aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZG38_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN10371.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
putative permease
L2_059_382G1_scaffold_1008_10
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12835..14094)
DNA (1260bp) protein (420aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DD56_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76724.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
sugar transporter
L2_059_382G1_scaffold_1008_11
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14360..15799
DNA (1440bp) protein (480aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Glutamate decarboxylase n=2 Tax=Parabacteroides RepID=B7B6F8_9PORP
glutamate decarboxylase
L2_059_382G1_scaffold_1008_12
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15802..16767
DNA (966bp) protein (322aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Glutaminase n=2 Tax=Parabacteroides johnsonii RepID=B7B6F7_9PORP
glsA; putative glutaminase
L2_059_382G1_scaffold_1008_13
unknown

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16999..17550
DNA (552bp) protein (184aa)

This feature has no annotations

L2_059_382G1_scaffold_1008_14
unknown

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17563..18000
DNA (438bp) protein (146aa)

This feature has no annotations

L2_059_382G1_scaffold_1008_15
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18162..19523
DNA (1362bp) protein (454aa)
Putative uncharacterized protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UII5_TANFA
Uncharacterized protein {ECO:0000313|EMBL:BAR51284.1}; TaxID=1307833 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia KS16.;"
hypothetical protein
L2_059_382G1_scaffold_1008_16
unknown

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comp(19890..20069)
DNA (180bp) protein (60aa)

This feature has no annotations

L2_059_382G1_scaffold_1008_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20123..20896)
DNA (774bp) protein (258aa)
Ion channel n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X6A6_9PORP
Ion channel {ECO:0000313|EMBL:CDD14669.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
potassium channel subunit
L2_059_382G1_scaffold_1008_18
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21132..22718
DNA (1587bp) protein (529aa)
Putative glutamate/gamma-aminobutyrate antiporter n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B6F4_9PORP
Putative glutamate/gamma-aminobutyrate antiporter {ECO:0000313|EMBL:EEC97972.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Amino acid transporters
Displaying 18 items

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