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L2_059_382G1_scaffold_1459

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_1459_1
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..222
DNA (222bp) protein (74aa)
2-oxoacid:ferredoxin/flavodoxin oxidoreductase, gamma subunit n=3 Tax=Parabacteroides RepID=B7B7K1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76461.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
ketoisovalerate oxidoreductase subunit vorA
L2_059_382G1_scaffold_1459_2
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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341..2452
DNA (2112bp) protein (704aa)
Uncharacterized protein n=2 Tax=Parabacteroides johnsonii RepID=B7B7K0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC97589.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_059_382G1_scaffold_1459_3
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2457..3284
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5XYT5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN05902.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
glutamine ABC transporter glutamine-binding protein
L2_059_382G1_scaffold_1459_4
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3317..4861)
DNA (1545bp) protein (515aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
PAS domain S-box protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZR73_9PORP
two-component system sensor histidine kinase
L2_059_382G1_scaffold_1459_5
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5047..6327
DNA (1281bp) protein (427aa)
Uncharacterized protein n=2 Tax=Parabacteroides johnsonii RepID=K5YSE5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN05904.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
ATP-dependent RNA helicase
L2_059_382G1_scaffold_1459_6
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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6617..8386
DNA (1770bp) protein (590aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z4C7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN05905.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
transcriptional regulator
L2_059_382G1_scaffold_1459_7
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8449..10560)
DNA (2112bp) protein (704aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
Transcription termination factor Rho n=2 Tax=Parabacteroides RepID=R5DI50_9PORP
rho; transcription termination factor Rho
L2_059_382G1_scaffold_1459_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10680..12014)
DNA (1335bp) protein (445aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5XYT9_9PORP
cell-cycle protein
L2_059_382G1_scaffold_1459_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12019..12783)
DNA (765bp) protein (255aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=K5ZB57_9PORP
Putative zinc ribbon domain protein {ECO:0000313|EMBL:EDN88177.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_059_382G1_scaffold_1459_10
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12785..13882)
DNA (1098bp) protein (366aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
Putative GTP cyclohydrolase 1 type 2 n=2 Tax=Parabacteroides RepID=B7B7I8_9PORP
hypothetical protein
L2_059_382G1_scaffold_1459_11
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13965..15722)
DNA (1758bp) protein (586aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EEC97604.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EEC97604.1};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=2 Tax=Parabacteroides johnsonii RepID=B7B7I7_9PORP
Displaying 11 items

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