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L2_059_382G1_scaffold_1636

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_1636_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..519
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BIQ5_9PORP
RND transporter HAE1/HME family permease protein {ECO:0000313|EMBL:CDD12777.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Cation/multidrug efflux pump
L2_059_382G1_scaffold_1636_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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519..1886
DNA (1368bp) protein (456aa)
Outer membrane efflux protein n=2 Tax=Parabacteroides merdae RepID=A7AFK9_9PORP
Outer membrane efflux protein {ECO:0000313|EMBL:EDN86835.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
outer membrane efflux protein
L2_059_382G1_scaffold_1636_3
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2046..3077
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AFK8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86834.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L2_059_382G1_scaffold_1636_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3116..3415
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X0S7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD12774.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L2_059_382G1_scaffold_1636_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3763..3879
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AFK5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86831.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L2_059_382G1_scaffold_1636_6
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3980..5065)
DNA (1086bp) protein (362aa)
Permease, YjgP/YjgQ family n=3 Tax=Parabacteroides RepID=B7B9K2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06599.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_059_382G1_scaffold_1636_7
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5078..6208)
DNA (1131bp) protein (377aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|RuleBase:RU003777, ECO:0000256|SAAS:SAAS00087750}; EC=2.4.2.29 {ECO:0000256|RuleBase:RU003777, ECO:0000256|SAAS:SAAS00087822};; Flags: Fragment;; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Queuine tRNA-ribosyltransferase n=4 Tax=Parabacteroides RepID=A7AFK3_9PORP
tRNA-guanine transglycosylase
L2_059_382G1_scaffold_1636_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6282..7832)
DNA (1551bp) protein (517aa)
Tat pathway signal sequence domain protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B9K4_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEC96881.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
ferredoxin-type protein
L2_059_382G1_scaffold_1636_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7832..8764)
DNA (933bp) protein (311aa)
Tat pathway signal sequence domain protein n=3 Tax=Parabacteroides RepID=B7B9K5_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEC96882.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_059_382G1_scaffold_1636_10
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8863..9657
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DRT6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78716.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_059_382G1_scaffold_1636_11
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9762..9887)
DNA (126bp) protein (42aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5YU61_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78717.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_059_382G1_scaffold_1636_12
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10206..10430
DNA (225bp) protein (75aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B9K9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78718.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_059_382G1_scaffold_1636_13
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10612..11247)
DNA (636bp) protein (212aa)
Nitroreductase family protein n=2 Tax=Parabacteroides johnsonii RepID=B7B9L0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN06592.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
nitroreductase
L2_059_382G1_scaffold_1636_14
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11303..13855
DNA (2553bp) protein (851aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DET3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78720.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
outer membrane protein/protective antigen OMA87
Displaying 14 items

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