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L2_059_382G1_scaffold_403

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_403_1
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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158..682
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DH18_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78069.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
Phosphoglycerate mutase
L2_059_382G1_scaffold_403_2
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(715..1128)
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Parabacteroides johnsonii RepID=B7BCR0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12940.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_059_382G1_scaffold_403_3
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1150..1716)
DNA (567bp) protein (189aa)
Xanthine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502}; Short=XPRTase {ECO:0000256|HAMAP-Rule:MF_01184};; EC=2.4.2.22 {ECO:0000256|HAMAP-Rule:MF_01184, ECO:0000256|SAAS:SAAS00064502};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
xanthine phosphoribosyltransferase (EC:2.4.2.22)
Xanthine phosphoribosyltransferase n=2 Tax=Parabacteroides johnsonii RepID=B7BCR1_9PORP
L2_059_382G1_scaffold_403_4
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1719..3089)
DNA (1371bp) protein (457aa)
Xanthine permease n=2 Tax=Parabacteroides johnsonii RepID=B7BCR2_9PORP
Xanthine permease {ECO:0000313|EMBL:EEC95775.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
purine permease
L2_059_382G1_scaffold_403_5
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3108..3947)
DNA (840bp) protein (280aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BCR3_9PORP
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EEC95776.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
L2_059_382G1_scaffold_403_6
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4170..5189)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZN45_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12936.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L-threonine aldolase
L2_059_382G1_scaffold_403_7
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5288..5797)
DNA (510bp) protein (170aa)
Sigma-70 region 2 n=2 Tax=Parabacteroides johnsonii RepID=B7BCR6_9PORP
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKN12935.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
RNA polymerase ECF-type sigma factor
L2_059_382G1_scaffold_403_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6059..7441
DNA (1383bp) protein (461aa)
Nodulation efficiency protein D n=2 Tax=Parabacteroides johnsonii RepID=B7BCR8_9PORP
Nodulation efficiency protein D {ECO:0000313|EMBL:EEC95781.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
membrane-bound serine protease
L2_059_382G1_scaffold_403_9
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7472..8110)
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AB69_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77157.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_059_382G1_scaffold_403_10
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8181..10448
DNA (2268bp) protein (756aa)
TrkA C-terminal domain protein n=2 Tax=Parabacteroides RepID=B7BCS0_9PORP
TrkA C-terminal domain protein {ECO:0000313|EMBL:EEC95783.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Na+/H+ antiporter
L2_059_382G1_scaffold_403_11
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10498..11259
DNA (762bp) protein (254aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZN40_9PORP
L2_059_382G1_scaffold_403_12
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11346..13262)
DNA (1917bp) protein (639aa)
Membrane protein insertase YidC n=3 Tax=Parabacteroides johnsonii RepID=K5ZNS2_9PORP
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
inner membrane protein translocase component YidC
L2_059_382G1_scaffold_403_13
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13272..14879)
DNA (1608bp) protein (536aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
pyrG; CTP synthetase (EC:6.3.4.2)
CTP synthase n=3 Tax=Parabacteroides RepID=B7BCS4_9PORP
L2_059_382G1_scaffold_403_14
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15212..15730
DNA (519bp) protein (173aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7BCS6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX78832.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_059_382G1_scaffold_403_15
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15754..16662)
DNA (909bp) protein (303aa)
Transcriptional regulator, AraC family n=3 Tax=Parabacteroides RepID=B7BCS7_9PORP
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEC95753.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
transcriptional regulator
L2_059_382G1_scaffold_403_16
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16904..17494
DNA (591bp) protein (197aa)
Transcriptional regulator, TetR family n=3 Tax=Parabacteroides RepID=B7BCS8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12926.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
transcriptional regulator
L2_059_382G1_scaffold_403_17
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17564..18916
DNA (1353bp) protein (451aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZNR7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12925.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
outer membrane efflux protein
L2_059_382G1_scaffold_403_18
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18954..19979
DNA (1026bp) protein (342aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZBA9_9PORP
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKN12924.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
membrane fusion protein transporter
L2_059_382G1_scaffold_403_19
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19992..23120
DNA (3129bp) protein (1043aa)
Heavy metal efflux pump, CzcA family n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BCT1_9PORP
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:EEC95757.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
acriflavin resistance protein
L2_059_382G1_scaffold_403_20
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23144..23437
DNA (294bp) protein (98aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7BCT2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77613.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
hypothetical protein
L2_059_382G1_scaffold_403_21
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23445..24146
DNA (702bp) protein (234aa)
Transcriptional regulatory protein RprY n=2 Tax=Parabacteroides johnsonii RepID=B7BCT3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12921.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L2_059_382G1_scaffold_403_22
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24172..24897
DNA (726bp) protein (242aa)
3-oxo-5-alpha-steroid 4-dehydrogenase. (EC:1.3.99.5)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DBP6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX77615.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
L2_059_382G1_scaffold_403_23
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24917..26143
DNA (1227bp) protein (409aa)
NADPH dehydrogenase (EC:1.6.99.1)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5ZBA5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12919.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L2_059_382G1_scaffold_403_24
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26143..26994
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K6AB56_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12918.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
short-chain dehydrogenase/reductase SDR
L2_059_382G1_scaffold_403_25
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


27232..27816
DNA (585bp) protein (195aa)
50S ribosomal protein L25 n=2 Tax=Parabacteroides johnsonii RepID=B7BCT7_9PORP
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
50S ribosomal protein L25
L2_059_382G1_scaffold_403_26
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27901..28464
DNA (564bp) protein (188aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=2 Tax=Parabacteroides RepID=K5ZN25_9PORP
L2_059_382G1_scaffold_403_27
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28481..28915
DNA (435bp) protein (145aa)
S4 domain protein n=3 Tax=Parabacteroides RepID=B7BCT9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX79051.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
heat shock protein 15
L2_059_382G1_scaffold_403_28
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28925..29536)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DFT9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX79053.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
L2_059_382G1_scaffold_403_29
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29540..30523)
DNA (984bp) protein (328aa)
Antioxidant, AhpC/TSA family n=3 Tax=Parabacteroides RepID=B7BCU1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN12913.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
thiol:disulfide interchange protein
L2_059_382G1_scaffold_403_30
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30526..31314)
DNA (789bp) protein (263aa)
4Fe-4S binding domain protein n=2 Tax=Parabacteroides johnsonii RepID=B7BCU2_9PORP
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEC95768.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
hypothetical protein
Displaying items 1-30 of 39 in total

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