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L2_059_382G1_scaffold_883

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_059_382G1_scaffold_883_1
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2..244)
DNA (243bp) protein (81aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5XYW3_9PORP
N-(5'-phosphoribosyl) anthranilate isomerase
L2_059_382G1_scaffold_883_2
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(241..1050)
DNA (810bp) protein (270aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|SAAS:SAAS00046689}; EC=4.1.1.48 {ECO:0000256|SAAS:SAAS00046705};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Indole-3-glycerol phosphate synthase n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B7F6_9PORP
trpC; indole-3-glycerol-phosphate synthase
L2_059_382G1_scaffold_883_3
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1061..2065)
DNA (1005bp) protein (335aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
Anthranilate phosphoribosyltransferase n=3 Tax=Parabacteroides RepID=B7B7F7_9PORP
anthranilate phosphoribosyltransferase
L2_059_382G1_scaffold_883_4
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2071..2679)
DNA (609bp) protein (203aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5YSG9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76315.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
anthranilate synthase component II
L2_059_382G1_scaffold_883_5
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2717..4120)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DBW7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX76314.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
anthranilate synthase component I
L2_059_382G1_scaffold_883_6
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4104..5321)
DNA (1218bp) protein (406aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=2 Tax=Parabacteroides RepID=B7B7G0_9PORP
L2_059_382G1_scaffold_883_7
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5999..6880
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z3N8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN05931.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
anti-FecI sigma factor, FecR
L2_059_382G1_scaffold_883_8
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6884..9574
DNA (2691bp) protein (897aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii CL02T12C29 RepID=K5Z4E7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN05930.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
TonB-dependent receptor plug
L2_059_382G1_scaffold_883_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9589..10572
DNA (984bp) protein (328aa)
Uncharacterized protein n=2 Tax=Parabacteroides johnsonii RepID=B7B7G5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN05929.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_059_382G1_scaffold_883_10
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10584..11177)
DNA (594bp) protein (198aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B7G6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN05928.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_059_382G1_scaffold_883_11
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11161..11283)
DNA (123bp) protein (41aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=B7B7G7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN05927.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
L2_059_382G1_scaffold_883_12
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11376..12260
DNA (885bp) protein (295aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7B7G8_9PORP
glucose-1-phosphate thymidylyltransferase
L2_059_382G1_scaffold_883_13
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12253..13323
DNA (1071bp) protein (357aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
GDP-L-fucose synthase n=1 Tax=Parabacteroides johnsonii CAG:246 RepID=R5DKN9_9PORP
GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase
L2_059_382G1_scaffold_883_14
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13327..14532
DNA (1206bp) protein (402aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
GDP-mannose 4,6-dehydratase n=3 Tax=Parabacteroides RepID=B7B7H0_9PORP
GDP-D-mannose dehydratase
L2_059_382G1_scaffold_883_15
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14643..15791
DNA (1149bp) protein (383aa)
OmpA family protein n=3 Tax=Parabacteroides RepID=B7B7H1_9PORP
OmpA family protein {ECO:0000313|EMBL:EEC97627.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
outer membrane protein OmpA
L2_059_382G1_scaffold_883_16
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15892..17289
DNA (1398bp) protein (466aa)
Undecaprenyl-phosphate glucose phosphotransferase n=3 Tax=Parabacteroides RepID=K5XYV0_9PORP
Undecaprenyl-phosphate glucose phosphotransferase {ECO:0000313|EMBL:CCX76483.1}; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
glycosyltransferase
L2_059_382G1_scaffold_883_17
Parabacteroides johnsonii CAG:246, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17340..17780
DNA (441bp) protein (147aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1263091 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides johnsonii CAG:246.;"
Putative Holliday junction resolvase n=2 Tax=Parabacteroides RepID=R5DI68_9PORP
Holliday junction resolvase-like protein
L2_059_382G1_scaffold_883_18
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17786..18343
DNA (558bp) protein (186aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=3 Tax=Parabacteroides RepID=B7B7H4_9PORP
L2_059_382G1_scaffold_883_19
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18368..19915
DNA (1548bp) protein (516aa)
Carboxyl transferase domain protein n=3 Tax=Parabacteroides RepID=B7B7H5_9PORP
Carboxyl transferase domain protein {ECO:0000313|EMBL:EEC97617.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
acetyl-CoA carboxylase, carboxyltransferase component
L2_059_382G1_scaffold_883_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19940..20272
DNA (333bp) protein (111aa)
Biotin-requiring enzyme n=7 Tax=Parabacteroides RepID=A7AAV1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14901.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
pyruvate/oxaloacetate carboxyltransferase
L2_059_382G1_scaffold_883_21
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20410..22533
DNA (2124bp) protein (708aa)
Uncharacterized protein n=2 Tax=Parabacteroides johnsonii RepID=K5XYU7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN05917.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
hypothetical protein
L2_059_382G1_scaffold_883_22
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23139..24719
DNA (1581bp) protein (527aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TFC5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY84000.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L2_059_382G1_scaffold_883_23
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24847..25269
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_23 RepID=D7K3L2_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI38839.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
hypothetical protein
L2_059_382G1_scaffold_883_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25122..25541)
DNA (420bp) protein (140aa)
Uncharacterized protein n=2 Tax=Faecalibacterium prausnitzii RepID=E2ZN06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05462.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
hypothetical protein
L2_059_382G1_scaffold_883_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25543..25722)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZN05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ05461.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Displaying 25 items

View Taxonomy