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L3_058_000G1_scaffold_63

Search features with annotation key words

Displaying items 1-30 of 171 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_63_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(366..629)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X9I3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ11966.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
transposase IS116/IS110/IS902 family protein
L3_058_000G1_scaffold_63_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1029..2033)
DNA (1005bp) protein (335aa)
Putative DNA replication protein DnaC n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPZ8_9FIRM
Putative DNA replication protein DnaC {ECO:0000313|EMBL:EHM52244.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_058_000G1_scaffold_63_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2034..3005)
DNA (972bp) protein (324aa)
DnaD domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NT93_9FIRM
DnaD domain protein {ECO:0000313|EMBL:EDN00656.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_058_000G1_scaffold_63_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3143..3457
DNA (315bp) protein (105aa)
Cell division protein ZapA n=3 Tax=Clostridiales RepID=G9YQ01_9FIRM
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_058_000G1_scaffold_63_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3549..5630
DNA (2082bp) protein (694aa)
Peptidase, U32 family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQ02_9FIRM
Peptidase, U32 family {ECO:0000313|EMBL:EHM52248.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
peptidase U32 family protein
L3_058_000G1_scaffold_63_6
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

5652..6101
DNA (450bp) protein (150aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CZT6_9FIRM
L3_058_000G1_scaffold_63_7
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6158..6745
DNA (588bp) protein (196aa)
Maf-like protein maf n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NR52_9FIRM
Maf-like protein maf {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
septum formation protein Maf
L3_058_000G1_scaffold_63_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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6761..7603
DNA (843bp) protein (281aa)
Cell shape-determining protein MreC n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NR51_9FIRM
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
mreC; putative rod shape-determining protein MreC
L3_058_000G1_scaffold_63_9
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7619..8131
DNA (513bp) protein (171aa)
Rod shape-determining protein MreD n=3 Tax=Clostridiales RepID=G9YQ06_9FIRM
Rod shape-determining protein MreD {ECO:0000313|EMBL:ERI71209.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_058_000G1_scaffold_63_10
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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8175..10304
DNA (2130bp) protein (710aa)
Putative penicillin-binding protein 2 n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NR49_9FIRM
Putative penicillin-binding protein 2 {ECO:0000313|EMBL:EDN01545.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
pbpA; penicillin-binding protein A
L3_058_000G1_scaffold_63_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10336..12198
DNA (1863bp) protein (621aa)
putative glycoside hydrolase (EC:3.2.1.-)
Alpha amylase, catalytic domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQ08_9FIRM
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EHM52188.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_058_000G1_scaffold_63_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12347..12745
DNA (399bp) protein (133aa)
Transporter, major facilitator family protein n=2 Tax=Clostridium symbiosum RepID=E9SNK1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95184.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
major facilitator superfamily protein
L3_058_000G1_scaffold_63_13
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12752..13501
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AUQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ32967.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
L3_058_000G1_scaffold_63_14
unknown

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13577..13963
DNA (387bp) protein (129aa)

This feature has no annotations

L3_058_000G1_scaffold_63_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14047..14502)
DNA (456bp) protein (152aa)
CBS domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DA74_9CLOT
CBS domain protein {ECO:0000313|EMBL:ERI76446.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
signal-transduction protein
L3_058_000G1_scaffold_63_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14550..15401)
DNA (852bp) protein (284aa)
Putative iron-sulfur cluster-binding protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YW13_9FIRM
Putative iron-sulfur cluster-binding protein {ECO:0000313|EMBL:EHM39712.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_058_000G1_scaffold_63_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15496..17637)
DNA (2142bp) protein (714aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=2 Tax=Clostridiales RepID=G9YPY2_9FIRM
L3_058_000G1_scaffold_63_18
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists


comp(17829..18095)
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HBA2_9FIRM
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
30S ribosomal protein S15
L3_058_000G1_scaffold_63_19
unknown

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comp(18333..18656)
DNA (324bp) protein (108aa)

This feature has no annotations

L3_058_000G1_scaffold_63_20
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18901..21099
DNA (2199bp) protein (733aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VZW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38260.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
putative surface layer protein
L3_058_000G1_scaffold_63_21
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21184..21999)
DNA (816bp) protein (272aa)
HAD hydrolase, family IIB n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQK0_9FIRM
HAD hydrolase, family IIB {ECO:0000313|EMBL:EDN01805.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_058_000G1_scaffold_63_22
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(22005..22592)
DNA (588bp) protein (196aa)
Putative proton-coupled thiamine transporter YuaJ n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H3H0_9FIRM
Putative proton-coupled thiamine transporter YuaJ {ECO:0000313|EMBL:CDB31325.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
putative thiamine transporter
L3_058_000G1_scaffold_63_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22848..23756)
DNA (909bp) protein (303aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
pseudouridine synthase (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVI5_9FIRM
L3_058_000G1_scaffold_63_24
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23731..24219)
DNA (489bp) protein (163aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BL13_9CLOT
L3_058_000G1_scaffold_63_25
Firmicutes bacterium CAG:822, Firmicutes, Bacteria

Not on your lists

comp(24823..25266)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:822 RepID=R5IVI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY46045.1}; TaxID=1263032 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:822.;"
transcriptional regulator, XRE family
L3_058_000G1_scaffold_63_26
unknown

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25359..25634
DNA (276bp) protein (92aa)

This feature has no annotations

L3_058_000G1_scaffold_63_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25674..26495
DNA (822bp) protein (274aa)
rrmA; ribosomal RNA large subunit methyltransferase A (EC:2.1.1.51)
Putative ribosomal RNA large subunit methyltransferase A n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUH1_9FIRM
Putative ribosomal RNA large subunit methyltransferase A {ECO:0000313|EMBL:EHM42291.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_058_000G1_scaffold_63_28
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26656..27834
DNA (1179bp) protein (393aa)
putative RNA helicase (EC:3.6.1.-)
DEAD/DEAH box helicase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSW7_9FIRM
DEAD/DEAH box helicase {ECO:0000313|EMBL:EDN00530.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L3_058_000G1_scaffold_63_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27923..28132
DNA (210bp) protein (70aa)
PspC domain protein n=3 Tax=Clostridiales RepID=G9YS50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53931.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Putative stress-responsive transcriptional regulator
L3_058_000G1_scaffold_63_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28267..28566
DNA (300bp) protein (100aa)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein (Fragment) n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUS2_9FIRM
6-O-methylguanine DNA methyltransferase, DNA binding domain protein {ECO:0000313|EMBL:EHM41618.1}; Flags: Fragment;; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
O-6-methylguanine DNA methyltransferase
Displaying items 1-30 of 171 in total

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