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L3_058_000G1_scaffold_91

Search features with annotation key words

Displaying items 1-30 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_91_1
unknown

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1..141
DNA (141bp) protein (47aa)

This feature has no annotations

L3_058_000G1_scaffold_91_2
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(195..1127)
DNA (933bp) protein (311aa)
Diguanylate cyclase domain protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DDV4_CLOS4
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERJ01020.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
hypothetical protein
L3_058_000G1_scaffold_91_3
unknown

Not on your lists

comp(1241..1363)
DNA (123bp) protein (41aa)

This feature has no annotations

L3_058_000G1_scaffold_91_4
unknown

Not on your lists

comp(1344..1502)
DNA (159bp) protein (53aa)

This feature has no annotations

L3_058_000G1_scaffold_91_5
unknown

Not on your lists

comp(1516..1950)
DNA (435bp) protein (145aa)

This feature has no annotations

L3_058_000G1_scaffold_91_6
unknown

Not on your lists

comp(2128..2292)
DNA (165bp) protein (55aa)

This feature has no annotations

L3_058_000G1_scaffold_91_7
unknown

Not on your lists

comp(2468..2620)
DNA (153bp) protein (51aa)

This feature has no annotations

L3_058_000G1_scaffold_91_8
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2632..3336)
DNA (705bp) protein (235aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N223_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS77016.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
Multimeric flavodoxin WrbA
L3_058_000G1_scaffold_91_9
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(3367..4326)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HG98_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EFS27363.2}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
hypothetical protein
L3_058_000G1_scaffold_91_10
unknown

Not on your lists

5262..5651
DNA (390bp) protein (130aa)

This feature has no annotations

L3_058_000G1_scaffold_91_11
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(5729..7210)
DNA (1482bp) protein (494aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
Asparagine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6ERU9_9FIRM
asnC; asparaginyl-tRNA synthetase
L3_058_000G1_scaffold_91_12
unknown

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comp(7470..7595)
DNA (126bp) protein (42aa)

This feature has no annotations

L3_058_000G1_scaffold_91_13
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7619..8335)
DNA (717bp) protein (239aa)
Uncharacterized conserved protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6KZE3_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CDB80628.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
hypothetical protein
L3_058_000G1_scaffold_91_14
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8762..10723)
DNA (1962bp) protein (654aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Clostridiales bacterium S5-A14a.;"
lysS; Lysine-tRNA ligase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Eubacterium infirmum F0142 RepID=H1PJ10_9FIRM
L3_058_000G1_scaffold_91_15
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(10740..11219)
DNA (480bp) protein (160aa)
Transcription elongation factor GreA n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E614_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
greA; Transcription elongation factor GreA
L3_058_000G1_scaffold_91_16
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

comp(11291..12382)
DNA (1092bp) protein (364aa)
Amino acid racemase n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DVA9_9FIRM
Amino acid racemase {ECO:0000313|EMBL:CDA92423.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
hypothetical protein
L3_058_000G1_scaffold_91_17
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12382..15939)
DNA (3558bp) protein (1186aa)
acyl-CoA synthetase (EC:6.2.1.3)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F0R8_9FIRM
AMP-binding enzyme {ECO:0000313|EMBL:EUC77728.1}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium sulci ATCC 35585.;"
L3_058_000G1_scaffold_91_18
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16265..16618
DNA (354bp) protein (118aa)
DNA-binding helix-turn-helix protein n=2 Tax=Oscillibacter RepID=U2PZX6_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK64766.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Predicted transcriptional regulators
L3_058_000G1_scaffold_91_19
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(16857..17399)
DNA (543bp) protein (181aa)
Carbonic anhydrase (EC:4.2.1.1)
Carbonate dehydratase n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VW47_9FIRM
Carbonate dehydratase {ECO:0000313|EMBL:KGJ55102.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
L3_058_000G1_scaffold_91_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17490..17930)
DNA (441bp) protein (147aa)
bltD; spermine/spermidine acetyltransferase (EC:2.3.1.57)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1C8G1_9FIRM
Putative diamine N-acetyltransferase {ECO:0000313|EMBL:EHM37760.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_058_000G1_scaffold_91_21
Clostridiales bacterium S5-A14a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18062..18769)
DNA (708bp) protein (236aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1230734 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Clostridiales bacterium S5-A14a.;"
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FP83_9FIRM
deoD; purine nucleoside phosphorylase
L3_058_000G1_scaffold_91_22
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18831..19892)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000378A80E
Uncharacterized protein {ECO:0000313|EMBL:KHS57802.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
Leucine-rich repeat (LRR) protein
L3_058_000G1_scaffold_91_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19903..21000)
DNA (1098bp) protein (366aa)
Lyzozyme M1 (1,4-beta-N-acetylmuramidase) n=2 Tax=Roseburia intestinalis RepID=D4L338_9FIRM
Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
Glycosyl hydrolase family 25 {ECO:0000313|EMBL:EEV01829.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_058_000G1_scaffold_91_24
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

21360..22328
DNA (969bp) protein (323aa)
L-asparaginase type I family protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SNN4_9FIRM
L-asparaginase type I family protein {ECO:0000313|EMBL:CCZ46527.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L-asparaginase type I family protein
L3_058_000G1_scaffold_91_25
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

22374..23756
DNA (1383bp) protein (461aa)
Transglutaminase domain protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6E4R4_9FIRM
Transglutaminase domain protein {ECO:0000313|EMBL:CDA92249.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
L3_058_000G1_scaffold_91_26
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(23937..27236)
DNA (3300bp) protein (1100aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F333_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03824.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
ATP-dependent nuclease subunit B
L3_058_000G1_scaffold_91_27
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27487..28878
DNA (1392bp) protein (464aa)
Amino acid permease-associated region n=1 Tax=Clostridium sp. CAG:226 RepID=R5BA16_9CLOT
Amino acid permease-associated region {ECO:0000313|EMBL:CCX51099.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
amino acid permease-associated protein
L3_058_000G1_scaffold_91_28
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28902..29666
DNA (765bp) protein (255aa)
Beta-lactamase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6B2_9CLOT
Beta-lactamase {ECO:0000313|EMBL:CCX51100.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
beta-lactamase
L3_058_000G1_scaffold_91_29
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

29768..31537
DNA (1770bp) protein (590aa)
Sigma54 specific transcriptional regulator Fis family n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6EL97_9FIRM
Sigma54 specific transcriptional regulator Fis family {ECO:0000313|EMBL:CDA90737.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
sigma-54 dependent trancsriptional regulator
L3_058_000G1_scaffold_91_30
Firmicutes bacterium CAG:238, Firmicutes, Bacteria

Not on your lists

31518..32297
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DQH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA90738.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;"
beta-lactamase
Displaying items 1-30 of 141 in total

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