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L3_058_000G1_scaffold_141

Search features with annotation key words

Displaying items 1-30 of 123 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_141_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(477..1229)
DNA (753bp) protein (251aa)
Purine or other phosphorylase family 1 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3X2_9CLOT
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:CCX50275.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
purine or other phosphorylase family 1 protein
L3_058_000G1_scaffold_141_2
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(1433..2407)
DNA (975bp) protein (325aa)
phosphotransacetylase (EC:2.3.1.8)
Phosphate acetyltransferase n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HRD0_9FIRM
Phosphate acetyltransferase {ECO:0000313|EMBL:CCY27026.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
L3_058_000G1_scaffold_141_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2580..3284
DNA (705bp) protein (235aa)
DNA-binding helix-turn-helix protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQ67_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EHM51939.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative Xre family DNA-binding protein
L3_058_000G1_scaffold_141_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3538..5346
DNA (1809bp) protein (603aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Elongation factor 4 n=2 Tax=Clostridiales RepID=G9YQ69_9FIRM
lepA; GTP-binding protein LepA
L3_058_000G1_scaffold_141_5
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5726..7087)
DNA (1362bp) protein (454aa)
serine protease (EC:3.4.21.-)
HtrA protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSX7_9FIRM
HtrA protein {ECO:0000313|EMBL:EDN00540.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L3_058_000G1_scaffold_141_6
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7219..8403)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00539.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
sporulation integral membrane protein YtvI
L3_058_000G1_scaffold_141_7
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8813..9652)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NT62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00625.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
degV family protein
L3_058_000G1_scaffold_141_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9693..10148)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NT63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00626.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
regulatory protein MarR
L3_058_000G1_scaffold_141_9
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10313..12661)
DNA (2349bp) protein (783aa)
S-layer protein Sap n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NXC6_9FIRM
S-layer protein Sap {ECO:0000313|EMBL:EDM98946.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
S-layer protein
L3_058_000G1_scaffold_141_10
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12868..15252)
DNA (2385bp) protein (795aa)
Homocysteine S-methyltransferase n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U6U9_ETHHY
homocysteine S-methyltransferase
Homocysteine S-methyltransferase {ECO:0000313|EMBL:ADU26916.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L3_058_000G1_scaffold_141_11
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15318..15968)
DNA (651bp) protein (217aa)
Vitamin B12 dependent methionine synthase, activation domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZH6_9FIRM
Vitamin B12 dependent methionine synthase, activation domain protein {ECO:0000313|EMBL:EDM98825.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Vitamin B12 dependent methionine synthase activation subunit
L3_058_000G1_scaffold_141_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15961..16845)
DNA (885bp) protein (295aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase n=2 Tax=Clostridium RepID=B6FS52_9CLOT
L3_058_000G1_scaffold_141_13
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17118..18398
DNA (1281bp) protein (427aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LW16_9FIRM
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:EOS63000.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
L3_058_000G1_scaffold_141_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18471..19649)
DNA (1179bp) protein (393aa)
Stage II sporulation protein P n=2 Tax=Clostridiales RepID=G9YR20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF57485.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
spoIIP; stage II sporulation protein P
L3_058_000G1_scaffold_141_15
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19779..20621
DNA (843bp) protein (281aa)
YihY family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NQF9_9FIRM
YihY family protein {ECO:0000313|EMBL:EDN01764.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ribonuclease BN
L3_058_000G1_scaffold_141_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20792..20914
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XA81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47259.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_058_000G1_scaffold_141_17
unknown

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21175..21537
DNA (363bp) protein (121aa)

This feature has no annotations

L3_058_000G1_scaffold_141_18
bacterium UASB270, Bacteria

Not on your lists

comp(21482..21796)
DNA (315bp) protein (105aa)
Flavin reductase n=1 Tax=delta proteobacterium NaphS2 RepID=D8FG42_9DELT
Flavin reductase {ECO:0000313|EMBL:GAK60835.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
FMN reductase, NADPH-dependent domain protein
L3_058_000G1_scaffold_141_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21972..22589)
DNA (618bp) protein (206aa)
Radical SAM domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ARY1_9CLOT
Radical SAM domain protein {ECO:0000313|EMBL:ERI68594.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_058_000G1_scaffold_141_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22604..23371)
DNA (768bp) protein (256aa)
Hydrolase, TatD family n=2 Tax=Clostridiales RepID=G9YML3_9FIRM
TatD family hydrolase {ECO:0000313|EMBL:EHO31858.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
putative deoxyribonuclease
L3_058_000G1_scaffold_141_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23500..23652
DNA (153bp) protein (51aa)
Transporter, CPA2 family n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ASN2_9CLOT
Transporter, CPA2 family {ECO:0000313|EMBL:EHM54002.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
u2; Na(+)/H(+) antiporter
L3_058_000G1_scaffold_141_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(23701..25695)
DNA (1995bp) protein (665aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=2 Tax=Clostridiales RepID=G9YNU4_9FIRM
L3_058_000G1_scaffold_141_23
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25685..26575)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98936.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L3_058_000G1_scaffold_141_24
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26776..28380)
DNA (1605bp) protein (535aa)
ABC transporter, ATP-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSV8_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN00521.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ABC transporter-like protein
L3_058_000G1_scaffold_141_25
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28595..28957
DNA (363bp) protein (121aa)
Transcriptional regulator, ArsR family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P994_9FIRM
Putative transcriptional repressor SmtB {ECO:0000313|EMBL:ERI79508.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ArsR family transcriptional regulator
L3_058_000G1_scaffold_141_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29027..29245
DNA (219bp) protein (73aa)
Heavy metal-associated domain protein n=3 Tax=Clostridiales RepID=G9YLA4_9FIRM
Heavy metal-associated domain protein {ECO:0000313|EMBL:ERI79506.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative ATPase
L3_058_000G1_scaffold_141_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29340..31190
DNA (1851bp) protein (617aa)
heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase (EC:3.6.3.5)
Heavy metal translocating P-type ATPase n=2 Tax=Clostridiales RepID=H1C6M5_9FIRM
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:KGF56172.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_058_000G1_scaffold_141_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31383..32810
DNA (1428bp) protein (476aa)
Putative aspartate ammonia-lyase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YUH2_9FIRM
Putative aspartate ammonia-lyase {ECO:0000313|EMBL:EHM42292.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
aspartate ammonia-lyase
L3_058_000G1_scaffold_141_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32925..35729)
DNA (2805bp) protein (935aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Isoleucine--tRNA ligase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVI8_9FIRM
isoleucyl-tRNA synthetase
L3_058_000G1_scaffold_141_30
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36081..36878)
DNA (798bp) protein (266aa)
DivIVA domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AGI8_9CLOT
DivIVA domain protein {ECO:0000313|EMBL:ERI64939.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative cell division protein
Displaying items 1-30 of 123 in total

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