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L3_058_000G1_scaffold_153

Search features with annotation key words

Displaying items 1-30 of 122 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_153_1
Lachnospiraceae bacterium 6_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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103..2940
DNA (2838bp) protein (946aa)
UvrABC system protein A n=2 Tax=Lachnospiraceae RepID=C9LCK2_BLAHA
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=658083 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_63FAA.;"
excinuclease ABC, A subunit
L3_058_000G1_scaffold_153_2
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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3009..3998
DNA (990bp) protein (330aa)
Cell shape determining protein, MreB/Mrl family n=3 Tax=Lachnospiraceae RepID=C9LCK1_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:CDC09455.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
rod shape-determining protein MreB
L3_058_000G1_scaffold_153_3
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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4042..6273
DNA (2232bp) protein (744aa)
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
helicase, putative, RecD/TraA family (EC:3.1.11.5)
RecD/TraA family helicase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QUF8_9FIRM
L3_058_000G1_scaffold_153_4
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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6266..6985
DNA (720bp) protein (240aa)
Amidophosphoribosyltransferase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RCJ7_9FIRM
Amidophosphoribosyltransferase {ECO:0000313|EMBL:CCZ32406.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
amidophosphoribosyltransferase
L3_058_000G1_scaffold_153_5
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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7222..7605
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RHF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32407.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_058_000G1_scaffold_153_6
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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7628..8623
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QUT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32408.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_058_000G1_scaffold_153_7
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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8656..9552
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R0X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32409.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
conserved hypothetical protein TIGR00159
L3_058_000G1_scaffold_153_8
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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9533..10825
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QUG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32410.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_058_000G1_scaffold_153_9
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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10837..11100
DNA (264bp) protein (88aa)
Phosphocarrier, HPr family n=2 Tax=Clostridiales RepID=U2CVM3_9CLOT
HPr family phosphocarrier {ECO:0000313|EMBL:EGN41960.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
phosphocarrier HPr family protein
L3_058_000G1_scaffold_153_10
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(11289..12251)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RHG4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ32412.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_058_000G1_scaffold_153_11
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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12442..13599
DNA (1158bp) protein (386aa)
SAM-dependent methyltransferases related to tRNA (Uracil-5-)-methyltransferase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QUU1_9FIRM
SAM-dependent methyltransferases related to tRNA (Uracil-5-)-methyltransferase {ECO:0000313|EMBL:CCZ32413.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
23S rRNA (uracil-5-)-methyltransferase RumA
L3_058_000G1_scaffold_153_12
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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13615..14415
DNA (801bp) protein (267aa)
Periplasmic component of the Tol biopolymer transport system n=1 Tax=Blautia sp. CAG:37 RepID=R7JNA8_9FIRM
Periplasmic component of the Tol biopolymer transport system {ECO:0000313|EMBL:CDE64377.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
sugar isomerase
L3_058_000G1_scaffold_153_13
unknown

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14449..14625
DNA (177bp) protein (59aa)

This feature has no annotations

L3_058_000G1_scaffold_153_14
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14678..15562)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 28-4 RepID=R9JEL0_9FIRM
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EXG86434.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
transcriptional regulator
L3_058_000G1_scaffold_153_15
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

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15714..16919
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XK67_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA15235.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
L3_058_000G1_scaffold_153_16
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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16936..17994
DNA (1059bp) protein (353aa)
Chlorophyll synthesis pathway protein BchC n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KRM2_9FIRM
Chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:EOS49055.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases
L3_058_000G1_scaffold_153_17
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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18007..19500
DNA (1494bp) protein (498aa)
uxaB; altronate oxidoreductase (EC:1.1.1.58)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WTZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX71723.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
L3_058_000G1_scaffold_153_18
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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19515..20996
DNA (1482bp) protein (494aa)
D-altronate dehydratase (EC:4.2.1.7)
D-altronate dehydratase {ECO:0000313|EMBL:CBL40259.1}; EC=4.2.1.7 {ECO:0000313|EMBL:CBL40259.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
D-altronate dehydratase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GR34_9FIRM
L3_058_000G1_scaffold_153_19
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

21032..21904
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5Y1Z5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA15236.1}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
amidohydrolase family protein
L3_058_000G1_scaffold_153_20
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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22015..22590
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T2R7_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN96450.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_058_000G1_scaffold_153_21
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22669..23703
DNA (1035bp) protein (345aa)
Sugar kinases, ribokinase family (EC:2.7.1.45)
2-dehydro-3-deoxygluconokinase n=1 Tax=Clostridium sp. ASF502 RepID=N2APB3_9CLOT
2-dehydro-3-deoxygluconokinase {ECO:0000313|EMBL:EMZ26319.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
L3_058_000G1_scaffold_153_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23854..24306)
DNA (453bp) protein (151aa)
DNA-binding helix-turn-helix protein n=8 Tax=Clostridium difficile RepID=G6B6Z0_CLODI
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EHJ31129.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
hypothetical protein
L3_058_000G1_scaffold_153_23
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24415..25668)
DNA (1254bp) protein (418aa)
Major Facilitator Superfamily n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L042_9FIRM
Major Facilitator Superfamily.
Major Facilitator Superfamily {ECO:0000313|EMBL:CBL12982.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_058_000G1_scaffold_153_24
unknown

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comp(26098..26259)
DNA (162bp) protein (54aa)

This feature has no annotations

L3_058_000G1_scaffold_153_25
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26316..27221)
DNA (906bp) protein (302aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000361957D
histidine kinase
L3_058_000G1_scaffold_153_26
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27234..28025)
DNA (792bp) protein (264aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=C9LA67_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:CDC08262.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
hypothetical protein
L3_058_000G1_scaffold_153_27
Blautia hydrogenotrophica, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28018..28932)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00037CCBEB
Putative uncharacterized protein {ECO:0000313|EMBL:EEG47243.1}; TaxID=476272 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hydrogenotrophica DSM 10507.;"
hypothetical protein
L3_058_000G1_scaffold_153_28
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29023..29688)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI00036B2278
Response regulator receiver domain protein {ECO:0000313|EMBL:EEX20867.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
transcriptional regulator
L3_058_000G1_scaffold_153_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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29987..30880
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VSB0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY93404.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
hypothetical protein
L3_058_000G1_scaffold_153_30
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30939..31190
DNA (252bp) protein (84aa)
Transcriptional regulator MerR family n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TXG3_9CLOT
Transcriptional regulator MerR family {ECO:0000313|EMBL:CCZ61532.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
MerR family transcriptional regulator
Displaying items 1-30 of 122 in total

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