ggKbase home page

L3_058_000G1_scaffold_165

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_165_1
Bacteroides sp. CAG:754, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(312..4445)
DNA (4134bp) protein (1378aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:754 RepID=R6D8A1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA84658.1}; TaxID=1262750 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:754.;"
two-component system sensor histidine kinase/response regulator
L3_058_000G1_scaffold_165_2
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4832..6778)
DNA (1947bp) protein (649aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003825A11
Uncharacterized protein {ECO:0000313|EMBL:EGK01331.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
L3_058_000G1_scaffold_165_3
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6900..8939)
DNA (2040bp) protein (680aa)
SusD family protein id=2555323 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
starch-binding protein
Tax=GWC2_Bacteroidetes_46_850_curated
L3_058_000G1_scaffold_165_4
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8952..12236)
DNA (3285bp) protein (1095aa)
TonB-dependent Receptor Plug domain-containing protein id=2555324 bin=GWC2_Bacteroidetes_46_850 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes
membrane protein
Tax=GWC2_Bacteroidetes_46_850_curated
L3_058_000G1_scaffold_165_5
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13155..14270)
DNA (1116bp) protein (372aa)
imidazole glycerol-phosphate dehydratase/histidinol phosphatase (EC:3.1.3.15 4.2.1.19)
Histidine biosynthesis hisB n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IVW8_9PORP
Histidine biosynthesis bifunctional protein HisB {ECO:0000256|SAAS:SAAS00082593}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
L3_058_000G1_scaffold_165_6
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14274..15302)
DNA (1029bp) protein (343aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
Histidinol-phosphate aminotransferase n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IVW9_9PORP
histidinol-phosphate aminotransferase
L3_058_000G1_scaffold_165_7
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15628..16536)
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IVX1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02771.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
cupin domain protein
L3_058_000G1_scaffold_165_8
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16533..17810)
DNA (1278bp) protein (426aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
Histidinol dehydrogenase n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WZE0_9PORP
hisD; histidinol dehydrogenase
L3_058_000G1_scaffold_165_9
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17810..18340)
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IVX4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02774.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
gcn5-related N-acetyltransferase
L3_058_000G1_scaffold_165_10
unknown

Not on your lists

comp(18337..18807)
DNA (471bp) protein (157aa)

This feature has no annotations

L3_058_000G1_scaffold_165_11
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18902..19753)
DNA (852bp) protein (284aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_00079, ECO:0000256|SAAS:SAAS00046302};; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
ATP phosphoribosyltransferase (homohexameric) (EC:2.4.2.17)
ATP phosphoribosyltransferase n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IVX5_9PORP
L3_058_000G1_scaffold_165_12
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20062..21258)
DNA (1197bp) protein (399aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J2J0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK00091.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
RND family efflux transporter MFP subunit
L3_058_000G1_scaffold_165_13
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21255..22520)
DNA (1266bp) protein (422aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J2I9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK00090.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
CzcA family heavy metal efflux pump
L3_058_000G1_scaffold_165_14
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22522..25641)
DNA (3120bp) protein (1040aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5J2I8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK00089.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
CzcA family heavy metal efflux pump
L3_058_000G1_scaffold_165_15
Bacteroides sp. CAG:189, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26323..27111
DNA (789bp) protein (263aa)
Predicted dinucleotide-utilizing enzyme (EC:1.4.1.21)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9IB37_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY50713.1}; TaxID=1262737 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:189.;"
L3_058_000G1_scaffold_165_16
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27094..27978)
DNA (885bp) protein (295aa)
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain protein n=3 Tax=Bacteroides RepID=E2NJ23_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB73785.1}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
dihydrofolate reductase
L3_058_000G1_scaffold_165_17
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28156..29523
DNA (1368bp) protein (456aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0G9_PALPW
two component sigma-54 specific transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADQ78328.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
L3_058_000G1_scaffold_165_18
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29526..30863
DNA (1338bp) protein (446aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Multi-sensor signal transduction histidine kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0H0_PALPW
multi-sensor signal transduction histidine kinase
L3_058_000G1_scaffold_165_19
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30939..32957)
DNA (2019bp) protein (673aa)
Uncharacterized protein n=1 Tax=Bacteroides cellulosilyticus CL02T12C19 RepID=I8VC69_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY24010.1}; TaxID=997874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus CL02T12C19.;"
hypothetical protein
L3_058_000G1_scaffold_165_20
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33067..35451)
DNA (2385bp) protein (795aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000380673C
Uncharacterized protein {ECO:0000313|EMBL:EGK03161.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
efflux ABC transporter permease
L3_058_000G1_scaffold_165_21
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35453..37789)
DNA (2337bp) protein (779aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI000363DF84
Uncharacterized protein {ECO:0000313|EMBL:EGK03156.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
ABC transporter permease
L3_058_000G1_scaffold_165_22
Odoribacter laneus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37892..40243)
DNA (2352bp) protein (784aa)
Putative uncharacterized protein n=1 Tax=Odoribacter laneus YIT 12061 RepID=H1DIV3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EHP46715.1}; TaxID=742817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter laneus YIT 12061.;"
hypothetical protein
L3_058_000G1_scaffold_165_23
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40345..41025)
DNA (681bp) protein (227aa)
ABC transporter related protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0H1_PALPW
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADQ78330.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
L3_058_000G1_scaffold_165_24
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41089..43431)
DNA (2343bp) protein (781aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T0H2_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ78331.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
L3_058_000G1_scaffold_165_25
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43443..45779)
DNA (2337bp) protein (779aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IUF8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03155.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
L3_058_000G1_scaffold_165_26
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(45908..47158)
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IUF7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03154.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
efflux transporter, rnd family, mfp subunit
L3_058_000G1_scaffold_165_27
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(47260..48585)
DNA (1326bp) protein (442aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IUF6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK03153.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
outer membrane efflux protein
L3_058_000G1_scaffold_165_28
unknown

Not on your lists

48837..49181
DNA (345bp) protein (115aa)

This feature has no annotations

L3_058_000G1_scaffold_165_29
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(49285..50268)
DNA (984bp) protein (328aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides reticulotermitis JCM 10512.;"
fabHB; 3-oxoacyl-(acyl-carrier-protein) synthase 3 protein 2 (EC:2.3.1.180)
3-oxoacyl-(Acyl carrier protein) synthase III n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BBG9_9PORP
L3_058_000G1_scaffold_165_30
Dysgonomonas gadei, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

51025..51819
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IWG9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK02479.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BAA-286.;"
hypothetical protein
Displaying items 1-30 of 83 in total

View Taxonomy