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L3_058_000G1_scaffold_184

Search features with annotation key words

Displaying items 1-30 of 107 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_184_1
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

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2..502
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5H9K9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26385.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
Amidases related to nicotinamidase
L3_058_000G1_scaffold_184_2
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

526..1419
DNA (894bp) protein (298aa)
Kinase PfkB family n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HE34_9FIRM
Kinase PfkB family {ECO:0000313|EMBL:CCY26384.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
PfkB domain-containing protein
L3_058_000G1_scaffold_184_3
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1539..2891
DNA (1353bp) protein (451aa)
3 N domain protein glycosyl hydrolase family n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5BV12_9FIRM
3 N domain protein glycosyl hydrolase family {ECO:0000313|EMBL:CCX59445.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
Beta-glucosidase
L3_058_000G1_scaffold_184_4
Lachnospiraceae bacterium 10-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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2953..5388
DNA (2436bp) protein (812aa)
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N8M3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS76362.1}; TaxID=1235800 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 10-1.;"
L3_058_000G1_scaffold_184_5
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5390..6013
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6EBD4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN35168.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_058_000G1_scaffold_184_6
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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6062..7039
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0JC34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS22732.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
glycosyltransferase
L3_058_000G1_scaffold_184_7
Eubacterium sp. CAG:161, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7057..7290
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:161 RepID=R5LBX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY70477.1}; TaxID=1262881 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:161.;"
phosphotransferase system, phosphocarrier protein HPr
L3_058_000G1_scaffold_184_8
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7391..7831
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Ruminococcus obeum CAG:39 RepID=R7DB07_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD86597.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_058_000G1_scaffold_184_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7847..8149)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8G0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78612.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Relaxase/Mobilisation nuclease domain.
L3_058_000G1_scaffold_184_10
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8098..8439)
DNA (342bp) protein (114aa)
Bacterial mobilisation protein (MobC) n=3 Tax=Blautia RepID=D4LXQ3_9FIRM
Bacterial mobilisation protein (MobC).
Bacterial mobilisation protein (MobC) {ECO:0000313|EMBL:CBL22406.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_058_000G1_scaffold_184_11
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8960..9913
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PH39_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22905.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
abortive infection bacteriophage resistance protein
L3_058_000G1_scaffold_184_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10073..10330)
DNA (258bp) protein (86aa)
Helix-turn-helix n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KSC4_9FIRM
Helix-turn-helix.
Helix-turn-helix {ECO:0000313|EMBL:CBL09776.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_058_000G1_scaffold_184_13
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10510..10845
DNA (336bp) protein (112aa)
Uncharacterized protein n=2 Tax=Blautia RepID=U2CW10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI94704.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_058_000G1_scaffold_184_14

Not on your lists

comp(10933..11241)
DNA (309bp) protein (103aa)
Protein containing Helix-turn-helix type 3 domain protein n=1 Tax=human gut metagenome RepID=K1V9Z0_9ZZZZ
Protein containing Helix-turn-helix type 3 domain protein {ECO:0000313|EMBL:EKC80756.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Helix-turn-helix.
L3_058_000G1_scaffold_184_15
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11807..12244
DNA (438bp) protein (146aa)
Sigma-70, region 4 n=2 Tax=Blautia RepID=A5ZNK8_9FIRM
Sigma-70, region 4.
Sigma-70, region 4 {ECO:0000313|EMBL:EDM88454.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
L3_058_000G1_scaffold_184_16
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12231..12512
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Roseburia intestinalis L1-82 RepID=C7GGT7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ23566.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L3_058_000G1_scaffold_184_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13028..13222
DNA (195bp) protein (65aa)
Excisionase family DNA binding domain-containing protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CDT0_9FIRM
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:EHO33473.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Excisionase from transposon Tn916.
L3_058_000G1_scaffold_184_18
Treponema vincentii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

13330..13542
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Treponema vincentii F0403 RepID=S3L8W6_9SPIO
Uncharacterized protein {ECO:0000313|EMBL:EPF46903.1}; TaxID=1125702 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema vincentii F0403.;"
hypothetical protein
L3_058_000G1_scaffold_184_19
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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13609..14892
DNA (1284bp) protein (428aa)
Site-specific recombinase XerD n=4 Tax=Clostridiales RepID=D7GVU4_9FIRM
Site-specific recombinase XerD
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEV00718.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
L3_058_000G1_scaffold_184_20
unknown

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15210..15323
DNA (114bp) protein (38aa)

This feature has no annotations

L3_058_000G1_scaffold_184_21
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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15486..16427
DNA (942bp) protein (314aa)
Diguanylate cyclase domain protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y7W9_9FIRM
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ESL04187.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
diguanylate cyclase (GGDEF) domain
L3_058_000G1_scaffold_184_22
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16529..18028)
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=Blautia producta RepID=UPI000360153B
Mannitol dehydrogenase domain protein {ECO:0000313|EMBL:ERI69254.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
mannitol dehydrogenase domain-containing protein
L3_058_000G1_scaffold_184_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18028..19509)
DNA (1482bp) protein (494aa)
altronate dehydratase (EC:4.2.1.7)
altronate hydrolase n=1 Tax=Blautia producta RepID=UPI00038194C3
SAF domain protein {ECO:0000313|EMBL:EFC96459.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
L3_058_000G1_scaffold_184_24
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19885..20343
DNA (459bp) protein (153aa)
Transcriptional regulator MarR family n=1 Tax=Clostridium sp. CAG:91 RepID=R6VPT0_9CLOT
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDD00598.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
MarR family transcriptional regulator
L3_058_000G1_scaffold_184_25
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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20405..22156
DNA (1752bp) protein (584aa)
ABC transporter ATP-binding protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JTU7_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDE67435.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
ABC-type multidrug transport system, ATPase and permease components
L3_058_000G1_scaffold_184_26
Clostridium sp. CAG:91, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22156..24063
DNA (1908bp) protein (636aa)
ABC-type multidrug transport system ATPase and permease components n=3 Tax=root RepID=R6VUC0_9CLOT
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CDD00590.1}; TaxID=1262845 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:91.;"
ABC-type multidrug transport system, ATPase and permease components
L3_058_000G1_scaffold_184_27
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24259..25314
DNA (1056bp) protein (352aa)
sorbitol dehydrogenase (EC:1.1.1.14)
Chlorophyll synthesis pathway protein BchC n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9JQ66_9FIRM
Chlorophyll synthesis pathway protein BchC {ECO:0000313|EMBL:EOS36278.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L3_058_000G1_scaffold_184_28
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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25377..28382
DNA (3006bp) protein (1002aa)
Efflux ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H1A3_9FIRM
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDB30515.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
ABC transporter integral membrane protein
L3_058_000G1_scaffold_184_29
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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28354..29181
DNA (828bp) protein (276aa)
ABC transporter related protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RFR7_9FIRM
ABC transporter related protein {ECO:0000313|EMBL:CCZ33571.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
ABC transporter ATP-binding protein
L3_058_000G1_scaffold_184_30
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29189..30292
DNA (1104bp) protein (368aa)
Ethanolamine utilization protein, EutH n=1 Tax=Clostridium sp. KLE 1755 RepID=U2CLB9_9CLOT
Ethanolamine utilization protein, EutH {ECO:0000313|EMBL:ERI68106.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
Ethanolamine utilization protein
Displaying items 1-30 of 107 in total

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