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L3_058_000G1_scaffold_287

Search features with annotation key words

Displaying items 1-30 of 131 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_287_1
unknown

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comp(156..458)
DNA (303bp) protein (101aa)

This feature has no annotations

L3_058_000G1_scaffold_287_2
unknown

Not on your lists

comp(520..1005)
DNA (486bp) protein (162aa)

This feature has no annotations

L3_058_000G1_scaffold_287_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1287..2156)
DNA (870bp) protein (290aa)
Putative oligopeptide ABC transporter, permease protein AppC n=2 Tax=Clostridiales RepID=U2B045_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF51991.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_058_000G1_scaffold_287_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2143..3099)
DNA (957bp) protein (319aa)
Putative oligopeptide ABC transporter, permease protein AppB n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BH35_9CLOT
Putative oligopeptide ABC transporter, permease protein AppB {ECO:0000313|EMBL:ERI71505.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
L3_058_000G1_scaffold_287_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3179..4777)
DNA (1599bp) protein (533aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CIY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27877.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ABC-type dipeptide transport system, periplasmic component
L3_058_000G1_scaffold_287_6
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4774..6609)
DNA (1836bp) protein (612aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
glmS; glucosamine-6-phosphate synthase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2L1_9FIRM
L3_058_000G1_scaffold_287_7
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6756..7703)
DNA (948bp) protein (316aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hprK; HPr kinase/phosphorylase HprK (EC:2.7.11.- 2.7.4.-)
HPr kinase/phosphorylase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2M2_9FIRM
L3_058_000G1_scaffold_287_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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7904..8092
DNA (189bp) protein (63aa)
50S ribosomal protein L28 n=3 Tax=Clostridiales RepID=G9YX58_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
rpmB; 50S ribosomal protein L28
L3_058_000G1_scaffold_287_9
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(8164..9207)
DNA (1044bp) protein (348aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I2P2_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB43535.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
ABC transporter
L3_058_000G1_scaffold_287_10
Clostridium sp. CAG:1024, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9204..9905)
DNA (702bp) protein (234aa)
Molybdate ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:1024 RepID=R5AK83_9CLOT
Molybdate ABC transporter permease protein {ECO:0000313|EMBL:CCX42254.1}; TaxID=1262770 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1024.;"
molybdate ABC transporter, permease protein
L3_058_000G1_scaffold_287_11
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(9877..10728)
DNA (852bp) protein (284aa)
Molybdate ABC transporter periplasmic molybdate-binding protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I060_9FIRM
Molybdate ABC transporter periplasmic molybdate-binding protein {ECO:0000313|EMBL:CDB43533.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
molybdenum ABC transporter, periplasmic molybdate-binding protein
L3_058_000G1_scaffold_287_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10794..11741)
DNA (948bp) protein (316aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PS61_9FIRM
Molybdenum cofactor synthesis domain protein {ECO:0000313|EMBL:EFB74438.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
molybdenum cofactor synthesis domain
L3_058_000G1_scaffold_287_13
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(11745..12704)
DNA (960bp) protein (320aa)
Cyclic pyranopterin phosphate synthase {ECO:0000256|SAAS:SAAS00064088}; EC=4.1.99.18 {ECO:0000256|SAAS:SAAS00064088};; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
Molybdenum cofactor biosynthesis protein A n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IDV5_9FIRM
molybdenum cofactor biosynthesis protein A, bacterial
L3_058_000G1_scaffold_287_14
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12713..13195)
DNA (483bp) protein (161aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q3Y1_9FIRM
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
GTP cyclohydrolase subunit MoaC
L3_058_000G1_scaffold_287_15
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(13200..14225)
DNA (1026bp) protein (342aa)
molybdopterin-binding protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B63622
Molybdopterin binding domain protein {ECO:0000313|EMBL:CDB43530.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
Molybdopterin biosynthesis enzyme
L3_058_000G1_scaffold_287_16
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14222..15262)
DNA (1041bp) protein (347aa)
Putative xanthine dehydrogenase accessory factor n=1 Tax=Clostridium sp. D5 RepID=F0YYH7_9CLOT
Putative xanthine dehydrogenase accessory factor {ECO:0000313|EMBL:EGB93279.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
L3_058_000G1_scaffold_287_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15405..16142
DNA (738bp) protein (246aa)
Putative selenium-dependent hydroxylase accessory protein YqeC n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIU3_9FIRM
Putative selenium-dependent hydroxylase accessory protein YqeC {ECO:0000313|EMBL:EFQ06992.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
probable selenium-dependent hydroxylase accessory protein YqeC
L3_058_000G1_scaffold_287_18
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16133..16942
DNA (810bp) protein (270aa)
Selenium-dependent molybdenum hydroxylase system protein, YqeB family n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHZ5_9FIRM
Selenium-dependent molybdenum hydroxylase system protein, YqeB family {ECO:0000313|EMBL:EDS09113.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
biotin/lipoyl attachment
L3_058_000G1_scaffold_287_19
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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16932..17972
DNA (1041bp) protein (347aa)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
selenophosphate synthase (EC:2.7.9.3)
Selenide, water dikinase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MQR4_9FIRM
L3_058_000G1_scaffold_287_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17929..18234
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8R5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35092.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_058_000G1_scaffold_287_21
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18239..18835
DNA (597bp) protein (199aa)
Selenium metabolism protein YedF n=1 Tax=Clostridium sp. CAG:169 RepID=R6BRL0_9CLOT
Selenium metabolism protein YedF {ECO:0000313|EMBL:CDA61756.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
hypothetical protein
L3_058_000G1_scaffold_287_22
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19622..20455)
DNA (834bp) protein (278aa)
Copper amine oxidase domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZP5_9FIRM
Copper amine oxidase domain protein {ECO:0000313|EMBL:EDM98398.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
putative cell wall hydrolase
L3_058_000G1_scaffold_287_23
unknown

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comp(20512..20622)
DNA (111bp) protein (37aa)

This feature has no annotations

L3_058_000G1_scaffold_287_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20691..22226)
DNA (1536bp) protein (512aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKC3_9FIRM
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_058_000G1_scaffold_287_25
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22243..22866)
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RZD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL63856.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
NADPH-dependent FMN reductase
L3_058_000G1_scaffold_287_26
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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23020..23400
DNA (381bp) protein (127aa)
Transcriptional regulator, MerR family n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LM67_9FIRM
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EET58282.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
putative transcriptional regulator
L3_058_000G1_scaffold_287_27
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23663..24286
DNA (624bp) protein (208aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=A7VE67_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58070.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_058_000G1_scaffold_287_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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24290..24757
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQK7_BIFLS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ52087.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_058_000G1_scaffold_287_29
unknown

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comp(24669..25232)
DNA (564bp) protein (188aa)

This feature has no annotations

L3_058_000G1_scaffold_287_30
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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25576..26148
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2Y8V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12838.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
putative domain HDIG-containing protein
Displaying items 1-30 of 131 in total

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