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L3_058_000G1_scaffold_335

Search features with annotation key words

Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_335_1
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(537..1166)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:633 RepID=R6FN78_9BACE
RNA ligase%2C Rnl2 family {ECO:0000313|EMBL:CRH71317.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
RNA ligase
L3_058_000G1_scaffold_335_2
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

comp(1163..1849)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6N1T4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC00306.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L3_058_000G1_scaffold_335_3
Leptotrichia sp. oral taxon 215, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(1849..2517)
DNA (669bp) protein (223aa)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780};; TaxID=1321779 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 215 str. W9775.;"
Uracil-DNA glycosylase (EC:3.2.2.-)
UPI0002E21C50 related cluster n=1 Tax=unknown RepID=UPI0002E21C50
L3_058_000G1_scaffold_335_4
unknown

Not on your lists

comp(2501..2626)
DNA (126bp) protein (42aa)

This feature has no annotations

L3_058_000G1_scaffold_335_5
unknown

Not on your lists

comp(2607..2852)
DNA (246bp) protein (82aa)

This feature has no annotations

L3_058_000G1_scaffold_335_6
unknown

Not on your lists

comp(2857..3048)
DNA (192bp) protein (64aa)

This feature has no annotations

L3_058_000G1_scaffold_335_7
unknown

Not on your lists

comp(3048..3287)
DNA (240bp) protein (80aa)

This feature has no annotations

L3_058_000G1_scaffold_335_8
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3302..4144)
DNA (843bp) protein (281aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=A5ZPX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD87856.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
hypothetical protein
L3_058_000G1_scaffold_335_9
Lactobacillus phage phi jlb1, Caudovirales, Viruses

Not on your lists

comp(4137..4484)
DNA (348bp) protein (116aa)
Putative ParB nuclease n=1 Tax=Lactobacillus phage c5 RepID=F8J155_9CAUD
Putative ParB protein {ECO:0000313|EMBL:AHB79884.1}; TaxID=1416334 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Lactobacillus phage phi jlb1.;"
ParB-like nuclease
L3_058_000G1_scaffold_335_10
Rhizobium phage 16-3, Caudovirales, Viruses

Not on your lists

comp(4487..5044)
DNA (558bp) protein (186aa)
p097 n=1 Tax=Rhizobium phage 16-3 RepID=B4UTY5_BP163
p097 {ECO:0000313|EMBL:ABF71361.1}; TaxID=10704 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Rhizobium phage 16-3 (Bacteriophage 16-3).;"
16-3p; p097
L3_058_000G1_scaffold_335_11
unknown

Not on your lists

comp(5102..5614)
DNA (513bp) protein (171aa)

This feature has no annotations

L3_058_000G1_scaffold_335_12
unknown

Not on your lists

comp(5596..5916)
DNA (321bp) protein (107aa)

This feature has no annotations

L3_058_000G1_scaffold_335_13
unknown

Not on your lists

comp(5917..6066)
DNA (150bp) protein (50aa)

This feature has no annotations

L3_058_000G1_scaffold_335_14
Lactobacillus phage LP65, Caudovirales, Viruses

Not on your lists

comp(6063..6554)
DNA (492bp) protein (164aa)
Orf36 n=1 Tax=Lactobacillus phage LP65 RepID=Q5ULS8_9CAUD
Orf36 {ECO:0000313|EMBL:AAV35856.1}; TaxID=298338 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae; Spounavirinae; unassigned Spounavirinae.;" source="Lactobacillus phage LP65.;"
hypothetical protein
L3_058_000G1_scaffold_335_15
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(6686..7396)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RKV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43676.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
hypothetical protein
L3_058_000G1_scaffold_335_16
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(7412..7951)
DNA (540bp) protein (180aa)
Putative phage protein n=1 Tax=Clostridium botulinum BKT015925 RepID=F4AAX2_CLOBO
Site-specific DNA methylase {ECO:0000313|EMBL:CRH68873.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein
L3_058_000G1_scaffold_335_17
unknown

Not on your lists

comp(8155..8463)
DNA (309bp) protein (103aa)

This feature has no annotations

L3_058_000G1_scaffold_335_18
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8541..9446)
DNA (906bp) protein (302aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KQB9_9CLOT
DNA polymerase III, alpha subunit
L3_058_000G1_scaffold_335_19
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9851..12070)
DNA (2220bp) protein (740aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KQB9_9CLOT
DNA polymerase III
L3_058_000G1_scaffold_335_20
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12087..14099)
DNA (2013bp) protein (671aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CC40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO34211.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
TOPRIM domain protein
L3_058_000G1_scaffold_335_21
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14144..14923)
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JN03_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS35321.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
L3_058_000G1_scaffold_335_22
unknown

Not on your lists

comp(14989..15378)
DNA (390bp) protein (130aa)

This feature has no annotations

L3_058_000G1_scaffold_335_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15382..16305)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LK86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:BAO04759.1}; TaxID=1407017 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum B str. Osaka05.;"
ATPase AAA
L3_058_000G1_scaffold_335_24
unknown

Not on your lists

comp(16333..16791)
DNA (459bp) protein (153aa)

This feature has no annotations

L3_058_000G1_scaffold_335_25
unknown

Not on your lists

17662..17814
DNA (153bp) protein (51aa)

This feature has no annotations

L3_058_000G1_scaffold_335_26
Firmicutes bacterium CAG:65, Firmicutes, Bacteria

Not on your lists

17833..18351
DNA (519bp) protein (173aa)
deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:65 RepID=R6ERZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA99939.1}; TaxID=1262994 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:65.;"
L3_058_000G1_scaffold_335_27
unknown

Not on your lists

18290..18508
DNA (219bp) protein (73aa)

This feature has no annotations

L3_058_000G1_scaffold_335_28
unknown

Not on your lists

18456..18953
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Paenibacillus elgii RepID=UPI000248C943
L3_058_000G1_scaffold_335_29
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18978..19184
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL72074.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_058_000G1_scaffold_335_30
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19190..20620
DNA (1431bp) protein (477aa)
nrdD; anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HE48_9CLOT
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EHF00275.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Displaying items 1-30 of 121 in total

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