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L3_058_000G1_scaffold_453

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Displaying items 1-30 of 140 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_453_1
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(302..538)
DNA (237bp) protein (79aa)
Putative regulatory protein (CxxC_CxxC_SSSS) n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB67_9ACTN
Putative regulatory protein (CxxC_CxxC_SSSS) {ECO:0000313|EMBL:CDA36075.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
FmdB family regulatory protein
L3_058_000G1_scaffold_453_2
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(627..3923)
DNA (3297bp) protein (1099aa)
4-alpha-glucanotransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHQ3_9ACTN
4-alpha-glucanotransferase {ECO:0000313|EMBL:CDA36074.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
4-alpha-glucanotransferase
L3_058_000G1_scaffold_453_3
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4355..6661)
DNA (2307bp) protein (769aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
glycogen/starch synthase (EC:2.4.1.21)
Glycogen synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8S3_9ACTN
L3_058_000G1_scaffold_453_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6752..7879)
DNA (1128bp) protein (376aa)
Glucose-1-phosphate adenylyltransferase, GlgD subunit {ECO:0000313|EMBL:EBA40347.1}; EC=2.7.7.27 {ECO:0000313|EMBL:EBA40347.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
glucose-1-phosphate adenylyltransferase subunit GlgD (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase, GlgD subunit n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6I8_9ACTN
L3_058_000G1_scaffold_453_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7884..9032)
DNA (1149bp) protein (383aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
nucleotidyl transferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=2 Tax=Collinsella RepID=A4E6I7_9ACTN
L3_058_000G1_scaffold_453_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9141..11567)
DNA (2427bp) protein (809aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6I6_9ACTN
L3_058_000G1_scaffold_453_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11662..13923)
DNA (2262bp) protein (754aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
1,4-alpha-glucan-branching protein (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6I5_9ACTN
L3_058_000G1_scaffold_453_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14255..14944
DNA (690bp) protein (230aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6I4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73380.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
thiamine pyrophosphokinase
L3_058_000G1_scaffold_453_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14948..15595
DNA (648bp) protein (216aa)
Thiamine diphosphokinase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F8X5_9ACTN
Thiamine pyrophosphokinase {ECO:0000313|EMBL:KGI73381.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
thiamine pyrophosphokinase
L3_058_000G1_scaffold_453_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16601..17116
DNA (516bp) protein (172aa)
Conserved domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E6I1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73382.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
NusG antitermination factor
L3_058_000G1_scaffold_453_11
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17255..18037
DNA (783bp) protein (261aa)
Bacterial sugar transferase {ECO:0000313|EMBL:EEP44036.1}; EC=2.4.1.- {ECO:0000313|EMBL:EEP44036.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Bacterial sugar transferase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FB36_9ACTN
Sugar transferases involved in lipopolysaccharide synthesis
L3_058_000G1_scaffold_453_12
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18038..18877
DNA (840bp) protein (280aa)
PEP-CTERM/exosortase 1-associated glycosyltransferase Daro_2409 family n=1 Tax=Clostridium sp. CAG:242 RepID=R6CZN4_9CLOT
PEP-CTERM/exosortase 1-associated glycosyltransferase Daro_2409 family {ECO:0000313|EMBL:CDA77076.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
glycosyl transferase family 2
L3_058_000G1_scaffold_453_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19043..20104
DNA (1062bp) protein (354aa)
Glycosyl transferase, group 1 n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GUM3_BIFLS
putative glycosyltransferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ACJ53169.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_058_000G1_scaffold_453_14
Parascardovia denticolens, Parascardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20097..20918
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Parascardovia denticolens IPLA 20019 RepID=I8JB59_PARDN
Uncharacterized protein {ECO:0000313|EMBL:EIT89061.1}; TaxID=1193128 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Parascardovia.;" source="Parascardovia denticolens IPLA 20019.;"
hypothetical protein
L3_058_000G1_scaffold_453_15
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20902..21654
DNA (753bp) protein (251aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FB40_9ACTN
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L3_058_000G1_scaffold_453_16
Lactobacillus ruminis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21654..22721
DNA (1068bp) protein (356aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Lactobacillus ruminis (strain ATCC 27782 / RF3) RepID=G2SQC6_LACRR
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:AEN77475.1}; TaxID=1069534 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus ruminis (strain ATCC 27782 / RF3).;"
L3_058_000G1_scaffold_453_17
Eggerthella sp. CAG:298, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22832..23929
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:298 RepID=R7B670_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD60444.1}; TaxID=1262876 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:298.;"
group 1 glycosyl transferase
L3_058_000G1_scaffold_453_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24221..25249
DNA (1029bp) protein (343aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MRY1_BIFL1
Putative polysaccharide polymerase {ECO:0000313|EMBL:KFI72077.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
polysaccharide polymerase
L3_058_000G1_scaffold_453_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25305..26660
DNA (1356bp) protein (452aa)
hypothetical protein n=1 Tax=Metascardovia criceti RepID=UPI000364042C
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KFI72075.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
hypothetical protein
L3_058_000G1_scaffold_453_20
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26989..28077
DNA (1089bp) protein (363aa)
Acyltransferase family n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DL39_CLOSC
Acyltransferase family.
Acyltransferase family {ECO:0000313|EMBL:CBK78413.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_058_000G1_scaffold_453_21
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28601..30280)
DNA (1680bp) protein (560aa)
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0003055761
Repeat protein {ECO:0000313|EMBL:EDP25570.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
Listeria/Bacterioides repeat
L3_058_000G1_scaffold_453_22
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30519..31346
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:702 RepID=R5U4P5_9BACE
Uncharacterised protein {ECO:0000313|EMBL:CEO33231.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_058_000G1_scaffold_453_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31390..32211
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FL42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGI73239.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_058_000G1_scaffold_453_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32554..32721)
DNA (168bp) protein (56aa)
Uncharacterized protein {ECO:0000313|EMBL:KGI73240.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_058_000G1_scaffold_453_25
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(32778..32954)
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:KGI73241.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_058_000G1_scaffold_453_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33270..33995
DNA (726bp) protein (242aa)
Endonuclease/Exonuclease/phosphatase family n=1 Tax=Roseburia sp. CAG:50 RepID=R5TMZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGI73242.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Endonuclease/Exonuclease/phosphatase family.
L3_058_000G1_scaffold_453_27
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33985..34563
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Butyrivibrio fibrisolvens 16/4 RepID=D4IWZ7_BUTFI
Uncharacterized protein {ECO:0000313|EMBL:KGI73243.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_058_000G1_scaffold_453_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

34553..35716
DNA (1164bp) protein (388aa)
Conserved domain protein n=2 Tax=Bacteria RepID=F0HN65_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73244.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_058_000G1_scaffold_453_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36048..37139
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ED76_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73245.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_058_000G1_scaffold_453_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(37479..38633)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) RepID=C8WP13_EGGLE
Uncharacterized protein {ECO:0000313|EMBL:KGI73246.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
Displaying items 1-30 of 140 in total

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