ggKbase home page

L3_058_000G1_scaffold_579

Search features with annotation key words

Displaying items 1-30 of 158 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_579_1
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

52..300
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X4D3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09655.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_058_000G1_scaffold_579_2
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(425..1060)
DNA (636bp) protein (212aa)
UPI0003D6176D related cluster n=1 Tax=unknown RepID=UPI0003D6176D
Uncharacterized protein {ECO:0000313|EMBL:ETI99287.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
L3_058_000G1_scaffold_579_3
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1286..2323
DNA (1038bp) protein (346aa)
UPI0003D59DCE related cluster n=1 Tax=unknown RepID=UPI0003D59DCE
Uncharacterized protein {ECO:0000313|EMBL:ETI99288.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
ABC transporter substrate-binding protein
L3_058_000G1_scaffold_579_4
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2698..3765
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XYW8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09652.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_058_000G1_scaffold_579_5
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4045..4851
DNA (807bp) protein (269aa)
UPI0003D5D1CE related cluster n=1 Tax=unknown RepID=UPI0003D5D1CE
Uncharacterized protein {ECO:0000313|EMBL:ETI95564.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L3_058_000G1_scaffold_579_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4937..5647
DNA (711bp) protein (237aa)
UPI0003D5AB2B related cluster n=1 Tax=unknown RepID=UPI0003D5AB2B
Uncharacterized protein {ECO:0000313|EMBL:ETI95565.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
exported polysaccharide deacetylase
L3_058_000G1_scaffold_579_7
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5724..5912
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0ABJ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA09649.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_058_000G1_scaffold_579_8

Not on your lists

6393..8210
DNA (1818bp) protein (606aa)
dnaG; DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X1P8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ17157.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_058_000G1_scaffold_579_9
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8240..9397
DNA (1158bp) protein (386aa)
RNA polymerase sigma factor SigA n=2 Tax=Clostridiales RepID=B0ABJ4_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
RNA polymerase sigma factor
L3_058_000G1_scaffold_579_10
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9472..10173
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95978.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L3_058_000G1_scaffold_579_11
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10185..11282
DNA (1098bp) protein (366aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X4C4_9CLOT
hypothetical protein
L3_058_000G1_scaffold_579_12
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11819..12370
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XB76_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09644.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
trpP; tryptophan transport protein
L3_058_000G1_scaffold_579_13
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12603..14705
DNA (2103bp) protein (701aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
resE9; sensor histidine kinase ResE (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X1P3_9CLOT
L3_058_000G1_scaffold_579_14

Not on your lists

14785..15081
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17163.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_058_000G1_scaffold_579_15

Not on your lists

15248..16417
DNA (1170bp) protein (390aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase n=2 Tax=Clostridiales RepID=B0ABK0_9FIRM
Alanine racemase 1 {ECO:0000313|EMBL:ETJ17164.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_058_000G1_scaffold_579_16

Not on your lists

comp(16535..17146)
DNA (612bp) protein (204aa)
Putative manganese efflux pump MntP n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X4C1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ17165.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_058_000G1_scaffold_579_17

Not on your lists

17327..17881
DNA (555bp) protein (185aa)
Rubredoxin n=2 Tax=Clostridiales RepID=B0ABK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17166.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
ruberythrin
L3_058_000G1_scaffold_579_18
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17975..18481)
DNA (507bp) protein (169aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABK3_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDQ95986.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
hypothetical protein
L3_058_000G1_scaffold_579_19
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18551..19642)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6SDC8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC44607.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
NADP-dependent oxidoreductase domain containing protein
L3_058_000G1_scaffold_579_20
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20098..21408
DNA (1311bp) protein (437aa)
aspS1; Aspartate-tRNA ligase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XYV5_9CLOT
Aspartate--tRNA ligase {ECO:0000313|EMBL:CDA09637.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_058_000G1_scaffold_579_21

Not on your lists

21468..21743
DNA (276bp) protein (92aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XM06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ17169.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
glutamyl-tRNA(Gln) amidotransferase, C subunit
L3_058_000G1_scaffold_579_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21756..23204
DNA (1449bp) protein (483aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
gatA2; Glutamyl-tRNA(Gln) amidotransferase subunit A 2 (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABK6_9FIRM
L3_058_000G1_scaffold_579_23
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23208..24650
DNA (1443bp) protein (481aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABK7_9FIRM
L3_058_000G1_scaffold_579_24

Not on your lists

24822..26351
DNA (1530bp) protein (510aa)
cls; cardiolipin synthetase (EC:2.7.8.-)
Phospholipase D domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ17172.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_058_000G1_scaffold_579_25
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26385..27134
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XYV0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09632.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
conserved hypothetical protein, DUF218 family
L3_058_000G1_scaffold_579_26
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27274..27660)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDQ95994.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
L3_058_000G1_scaffold_579_27
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27748..28740
DNA (993bp) protein (331aa)
Transporter small conductance mechanosensitive ion channel MscS family protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X4B6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETI92423.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
mechanosensitive ion channel protein
L3_058_000G1_scaffold_579_28
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28960..29610
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XB61_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA09629.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_058_000G1_scaffold_579_29
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29643..30302)
DNA (660bp) protein (220aa)
Superoxide dismutase, Mn/Fe family {ECO:0000313|EMBL:EDQ95998.1}; EC=1.15.1.1 {ECO:0000313|EMBL:EDQ95998.1};; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
Superoxide dismutase, Mn/Fe family n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ABL5_9FIRM
sodA; superoxide dismutase
L3_058_000G1_scaffold_579_30
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30482..31060
DNA (579bp) protein (193aa)
Tellurium resistance protein n=2 Tax=Clostridium bartlettii CAG:1329 RepID=R5XYU5_9CLOT
Tellurium resistance protein {ECO:0000313|EMBL:CDA09627.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
tellurium resistance protein
Displaying items 1-30 of 158 in total

View Taxonomy