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L3_058_000G1_scaffold_5147

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_5147_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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634..1698
DNA (1065bp) protein (355aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SS96_CLOSY
Sua5/YciO/YrdC/YwlC family protein
L3_058_000G1_scaffold_5147_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1712..2245
DNA (534bp) protein (178aa)
Deoxycytidylate deaminase (EC:3.5.4.12)
Cytidine and deoxycytidylate deaminase zinc-binding region n=4 Tax=Clostridium RepID=E9SS95_CLOSY
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:ERI78843.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_058_000G1_scaffold_5147_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2247..4079
DNA (1833bp) protein (611aa)
Fe-S oxidoreductase (EC:4.-.-.-)
Radical SAM domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SS94_CLOSY
Radical SAM domain-containing protein {ECO:0000313|EMBL:EGA93599.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_000G1_scaffold_5147_4
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4105..4761
DNA (657bp) protein (219aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
endonuclease III (EC:4.2.99.18)
Endonuclease III n=3 Tax=Clostridium RepID=E7GNI9_CLOSY
L3_058_000G1_scaffold_5147_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4803..5594
DNA (792bp) protein (264aa)
exonuclease, DNA polymerase III, epsilon subunit family (EC:2.7.7.7)
DNA polymerase III PolC-type n=2 Tax=Clostridium RepID=E7GNI8_CLOSY
DNA polymerase III PolC-type {ECO:0000313|EMBL:EGA93597.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_000G1_scaffold_5147_6
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5587..5703
DNA (117bp) protein (39aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FD51_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05667.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_000G1_scaffold_5147_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5768..7330
DNA (1563bp) protein (521aa)
VanW family protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GNI7_CLOSY
VanW family protein {ECO:0000313|EMBL:EGA93596.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Uncharacterized vancomycin resistance protein
L3_058_000G1_scaffold_5147_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7333..7950
DNA (618bp) protein (206aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9SS90_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05665.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Hydrogenase maturation factor
L3_058_000G1_scaffold_5147_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7995..8477
DNA (483bp) protein (161aa)
Transcriptional regulator, AsnC family n=4 Tax=Clostridium RepID=E9SS89_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93594.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Transcriptional regulators
L3_058_000G1_scaffold_5147_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8474..9649
DNA (1176bp) protein (392aa)
Aminotransferase, class I/II n=3 Tax=Clostridium RepID=E9SS88_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05663.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Aspartate/tyrosine/aromatic aminotransferase
L3_058_000G1_scaffold_5147_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9652..10143
DNA (492bp) protein (164aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Predicted rRNA methylase (SpoU class) (EC:2.1.1.-)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=2 Tax=Clostridium symbiosum RepID=E7GNI3_CLOSY
L3_058_000G1_scaffold_5147_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10319..11458
DNA (1140bp) protein (380aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=4 Tax=Clostridium RepID=E7GNI2_CLOSY
L3_058_000G1_scaffold_5147_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11544..12884)
DNA (1341bp) protein (447aa)
Membrane protein n=2 Tax=Clostridium RepID=E7GNI1_CLOSY
Membrane protein {ECO:0000313|EMBL:EGA93590.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
norM; Na+-driven multidrug efflux pump
L3_058_000G1_scaffold_5147_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12871..13317)
DNA (447bp) protein (149aa)
Putative uncharacterized protein n=2 Tax=Clostridium RepID=E7GNI0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93589.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Transcriptional regulators
L3_058_000G1_scaffold_5147_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13487..14209
DNA (723bp) protein (241aa)
Response regulator receiver domain protein n=2 Tax=Clostridium RepID=U2DGW7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05658.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
response regulator receiver and ANTAR domain-containing protein
L3_058_000G1_scaffold_5147_16
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14211..15266
DNA (1056bp) protein (352aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SS82_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05657.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_5147_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15336..16079
DNA (744bp) protein (248aa)
Transcriptional regulator, GntR family n=4 Tax=Clostridium RepID=E9SS81_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93586.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
GntR family transcriptional regulator
L3_058_000G1_scaffold_5147_18
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16386..17453
DNA (1068bp) protein (356aa)
TRAP transporter solute receptor, DctP family n=4 Tax=Clostridium RepID=U2DBJ2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05655.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_5147_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17548..18033
DNA (486bp) protein (162aa)
Uncharacterized protein n=2 Tax=Clostridium symbiosum RepID=E9SS79_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI78826.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
putative membrane protein
L3_058_000G1_scaffold_5147_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18030..19331
DNA (1302bp) protein (434aa)
TRAP transporter, DctM subunit n=4 Tax=Clostridium RepID=E9SS78_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93583.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_000G1_scaffold_5147_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19444..20106
DNA (663bp) protein (221aa)
Dimethylmenaquinone methyltransferase n=4 Tax=Clostridium RepID=E7GNH3_CLOSY
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:EGA93582.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
dimethylmenaquinone methyltransferase
L3_058_000G1_scaffold_5147_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20142..20972
DNA (831bp) protein (277aa)
Hydrolase, carbon-nitrogen family n=3 Tax=Clostridium RepID=U2C451_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93581.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
Displaying 22 items

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