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L3_058_000G1_scaffold_2147

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_2147_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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903..2342
DNA (1440bp) protein (480aa)
Ethanolamine utilization protein EutA n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GNH1_CLOSY
Ethanolamine utilization protein EutA {ECO:0000313|EMBL:EGA93751.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition
L3_058_000G1_scaffold_2147_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2411..3784
DNA (1374bp) protein (458aa)
Ethanolamine ammonia lyase large subunit n=3 Tax=Clostridium symbiosum RepID=E7GNH0_CLOSY
Ethanolamine ammonia lyase large subunit {ECO:0000313|EMBL:EGA93750.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ethanolamine ammonia-lyase heavy chain EutB
L3_058_000G1_scaffold_2147_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3789..4838
DNA (1050bp) protein (350aa)
Ethanolamine ammonia-lyase light chain {ECO:0000256|HAMAP-Rule:MF_00601}; EC=4.3.1.7 {ECO:0000256|HAMAP-Rule:MF_00601};; Ethanolamine ammonia-lyase small subunit {ECO:0000256|HAMAP-Rule:MF_00601}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Ethanolamine ammonia-lyase light chain (EC:4.3.1.7)
Ethanolamine ammonia-lyase, light subunit n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SS73_CLOSY
L3_058_000G1_scaffold_2147_4
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4895..5548
DNA (654bp) protein (218aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FD31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05647.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Ethanolamine utilization protein
L3_058_000G1_scaffold_2147_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5538..7073
DNA (1536bp) protein (512aa)
Acetaldehyde dehydrogenase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2B9Y1_CLOSY
Acetaldehyde dehydrogenase {ECO:0000313|EMBL:ERI74944.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
aldehyde-alcohol dehydrogenase
L3_058_000G1_scaffold_2147_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7296..7583
DNA (288bp) protein (96aa)
Major carboxysome shell protein 1A n=4 Tax=Clostridium RepID=U2D5X0_CLOSY
Major carboxysome shell protein 1A {ECO:0000313|EMBL:ERI74946.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
ribonuclease 3
L3_058_000G1_scaffold_2147_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7670..7957
DNA (288bp) protein (96aa)
BMC domain protein n=4 Tax=Clostridium RepID=E9SS69_CLOSY
Major carboxysome shell protein 1A {ECO:0000313|EMBL:ERI74947.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
microcompartments protein
L3_058_000G1_scaffold_2147_8
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7970..8698
DNA (729bp) protein (243aa)
Putative ATP:cob(I)alamin adenosyltransferase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SS68_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05643.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Propanediol utilization protein
L3_058_000G1_scaffold_2147_9
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8763..9698
DNA (936bp) protein (312aa)
Propanediol utilization protein PduL n=2 Tax=Clostridium RepID=E9SS67_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05642.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Propanediol utilization protein
L3_058_000G1_scaffold_2147_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9695..9973
DNA (279bp) protein (93aa)
Carbon dioxide concentrating mechanism/carboxysome shell protein n=3 Tax=Clostridium symbiosum RepID=E7GNG2_CLOSY
Carbon dioxide concentrating mechanism/carboxysome shell protein {ECO:0000313|EMBL:EGA93742.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L3_058_000G1_scaffold_2147_11
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9975..11333
DNA (1359bp) protein (453aa)
Respiratory-chain NADH dehydrogenase 51 Kd subunit n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SS65_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05640.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Predicted NADH:ubiquinone oxidoreductase, subunit RnfC
L3_058_000G1_scaffold_2147_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11521..12066
DNA (546bp) protein (182aa)
Carbon dioxide concentrating mechanism/carboxysome shell protein n=4 Tax=Clostridium RepID=E7GNG0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05639.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Carbon dioxide concentrating mechanism/carboxysome shell protein
L3_058_000G1_scaffold_2147_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12080..12442
DNA (363bp) protein (121aa)
Ethanolamine utilization protein n=3 Tax=Clostridium RepID=E7GNF9_CLOSY
Ethanolamine utilization protein {ECO:0000313|EMBL:EGA93739.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
pduU_1; propanediol utilization protein PduU
L3_058_000G1_scaffold_2147_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12446..12907
DNA (462bp) protein (154aa)
Ethanolamine utilization protein n=3 Tax=Clostridium symbiosum RepID=E7GNF8_CLOSY
Ethanolamine utilization protein {ECO:0000313|EMBL:EGA93738.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
eutP; ethanolamine utilization protein eutP
L3_058_000G1_scaffold_2147_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13014..13430)
DNA (417bp) protein (139aa)
Dinitrogenase iron-molybdenum cofactor n=2 Tax=Clostridium RepID=E9SS61_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05718.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
peptidylprolyl isomerase
L3_058_000G1_scaffold_2147_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13745..14734)
DNA (990bp) protein (330aa)
1-aminocyclopropane-1-carboxylate deaminase (EC:3.5.99.7)
Pyridoxal-phosphate dependent protein n=2 Tax=Clostridium symbiosum RepID=U2D0G2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93736.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_000G1_scaffold_2147_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14779..16200)
DNA (1422bp) protein (474aa)
Na+/H+ antiporter NhaC n=4 Tax=Clostridium RepID=E7GNF5_CLOSY
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:EGA93735.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Na+/H+ antiporter NhaC
L3_058_000G1_scaffold_2147_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16595..17272
DNA (678bp) protein (226aa)
YheO domain-containing protein n=3 Tax=Clostridium symbiosum RepID=E7GNF4_CLOSY
YheO domain-containing protein {ECO:0000313|EMBL:EGA93734.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_000G1_scaffold_2147_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17420..19357)
DNA (1938bp) protein (646aa)
Spermidine/putrescine-binding periplasmic protein PotD n=3 Tax=Clostridium RepID=E7GNF3_CLOSY
ABC transporter, solute-binding protein {ECO:0000313|EMBL:ERI74961.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Spermidine/putrescine-binding periplasmic protein
L3_058_000G1_scaffold_2147_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19357..20178)
DNA (822bp) protein (274aa)
ABC transporter, permease protein n=4 Tax=Clostridium RepID=E9SS56_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93732.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ABC-type spermidine/putrescine transport system, permease component I
L3_058_000G1_scaffold_2147_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20171..21247)
DNA (1077bp) protein (359aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
spermidine/putrescine ABC transporter ATP-binding subunit (EC:3.6.3.31)
Spermidine/putrescine import ATP-binding protein PotA n=3 Tax=Clostridium RepID=G5FD12_9CLOT
L3_058_000G1_scaffold_2147_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21272..21805)
DNA (534bp) protein (178aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridium RepID=U2B9Z7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05711.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
XRE family transcriptional regulator
L3_058_000G1_scaffold_2147_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22834..23940
DNA (1107bp) protein (369aa)
3-carboxymuconate cyclase (EC:3.1.1.31)
Uncharacterized protein n=3 Tax=Clostridium RepID=U2D5T8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI74906.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_058_000G1_scaffold_2147_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24098..25204
DNA (1107bp) protein (369aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BSV1_CLOSY
L3_058_000G1_scaffold_2147_25
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25742..26338
DNA (597bp) protein (199aa)
TIGR01440 family protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SS51_CLOSY
UPF0340 protein HMPREF1020_02354 {ECO:0000256|HAMAP-Rule:MF_00800}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
conserved hypothetical protein TIGR01440
L3_058_000G1_scaffold_2147_26
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26432..27982
DNA (1551bp) protein (517aa)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D5U2_CLOSY
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:ERI74911.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Displaying 26 items

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