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L3_058_000G1_scaffold_2167

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_2167_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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237..2522
DNA (2286bp) protein (762aa)
Copper-exporting ATPase n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BK13_CLOSY
Copper-exporting ATPase {ECO:0000313|EMBL:ERI78469.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
copper-translocating P-type ATPase
L3_058_000G1_scaffold_2167_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2587..2889
DNA (303bp) protein (101aa)
Copper-sensing transcriptional repressor CsoR n=2 Tax=Clostridium RepID=E7GKI0_CLOSY
Copper-sensing transcriptional repressor CsoR {ECO:0000313|EMBL:EGA94632.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_000G1_scaffold_2167_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2917..3111
DNA (195bp) protein (65aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9STS3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94631.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
heavy metal transport/detoxification protein
L3_058_000G1_scaffold_2167_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4133..5362)
DNA (1230bp) protein (410aa)
Sodium/glutamate symporter n=2 Tax=Clostridium symbiosum RepID=E7GKH8_CLOSY
Sodium/glutamate symporter {ECO:0000313|EMBL:EGA94630.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
gltS; sodium/glutamate symporter
L3_058_000G1_scaffold_2167_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5618..5944
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C1T3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI78475.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_058_000G1_scaffold_2167_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5989..6945)
DNA (957bp) protein (319aa)
ATP-dependent DNA ligase domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DFW5_CLOSY
ATP-dependent DNA ligase domain protein {ECO:0000313|EMBL:ERI78476.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
ATP dependent DNA ligase
L3_058_000G1_scaffold_2167_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6942..7751)
DNA (810bp) protein (270aa)
Probable DNA repair protein HMPREF9474_01420 n=2 Tax=Clostridium symbiosum RepID=E7GKH5_CLOSY
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Ku protein
L3_058_000G1_scaffold_2167_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7959..9599
DNA (1641bp) protein (547aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GKH4_CLOSY
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:EGA94626.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
peptidase S8 and S53 subtilisin kexin sedolisin
L3_058_000G1_scaffold_2167_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9665..9919)
DNA (255bp) protein (85aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9STS9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94625.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_000G1_scaffold_2167_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10066..10983
DNA (918bp) protein (306aa)
Transcriptional regulator, LysR family n=3 Tax=Clostridium RepID=E9STT0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94624.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_000G1_scaffold_2167_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11048..11944)
DNA (897bp) protein (299aa)
LysR substrate binding domain protein n=4 Tax=Clostridium RepID=U2DFW9_CLOSY
Transcriptional regulator {ECO:0000313|EMBL:EGA94623.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
transcriptional regulator
L3_058_000G1_scaffold_2167_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12199..13011
DNA (813bp) protein (271aa)
MoxR-like ATPase n=3 Tax=Clostridium RepID=E7GKH0_CLOSY
MoxR-like ATPase {ECO:0000313|EMBL:EGA94622.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ATPase
L3_058_000G1_scaffold_2167_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13001..14203
DNA (1203bp) protein (401aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GKG9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94621.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_000G1_scaffold_2167_14
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14253..15005)
DNA (753bp) protein (251aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
3-dehydroquinate dehydratase, type I (EC:4.2.1.10)
3-dehydroquinate dehydratase n=4 Tax=Clostridium RepID=E7GKG8_CLOSY
L3_058_000G1_scaffold_2167_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15279..15473
DNA (195bp) protein (65aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=E9STT5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04680.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_000G1_scaffold_2167_16
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15623..15727
DNA (105bp) protein (35aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FFY5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04681.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_000G1_scaffold_2167_17
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15893..17605
DNA (1713bp) protein (571aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Potassium-transporting ATPase A chain n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9STT6_CLOSY
potassium-transporting ATPase subunit A
L3_058_000G1_scaffold_2167_18
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17624..19708
DNA (2085bp) protein (695aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
kdpB_atkB; potassium-transporting ATPase subunit B (EC:3.6.3.12)
Potassium-transporting ATPase B chain n=2 Tax=Clostridium RepID=E9STT7_CLOSY
L3_058_000G1_scaffold_2167_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19788..20432
DNA (645bp) protein (215aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
kdpC; potassium-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain n=3 Tax=Clostridium RepID=E7GKG2_CLOSY
L3_058_000G1_scaffold_2167_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20838..23525
DNA (2688bp) protein (896aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Osmosensitive K+ channel histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Clostridium symbiosum RepID=E9STU0_CLOSY
L3_058_000G1_scaffold_2167_21
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23518..24216
DNA (699bp) protein (233aa)
Response regulator receiver domain protein n=2 Tax=Clostridium RepID=E9STU1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04686.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
kdpE; OmpR family two component system KDP operon response regulator
L3_058_000G1_scaffold_2167_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24513..25964
DNA (1452bp) protein (484aa)
Tetratricopeptide repeat protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DAJ8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04687.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Suppressor of fused protein (SUFU).
L3_058_000G1_scaffold_2167_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25961..27235
DNA (1275bp) protein (425aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GKF6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94764.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_000G1_scaffold_2167_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27225..27701
DNA (477bp) protein (159aa)
Membrane flanked domain-containing protein n=3 Tax=Clostridium symbiosum RepID=E7GKF5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI78494.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Bacterial membrane flanked domain.
Displaying 24 items

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