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L3_058_000G1_scaffold_2470

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_2470_1
unknown

Not on your lists

comp(374..613)
DNA (240bp) protein (80aa)

This feature has no annotations

L3_058_000G1_scaffold_2470_2
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(744..1325)
DNA (582bp) protein (194aa)
HTH domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C4A3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07714.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Predicted small molecule binding protein (contains 3H domain)
L3_058_000G1_scaffold_2470_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1614..2468)
DNA (855bp) protein (285aa)
Nicotinate-nucleotide diphosphorylase n=2 Tax=Clostridium RepID=G5F709_9CLOT
Nicotinate-nucleotide diphosphorylase {ECO:0000313|EMBL:EHF07713.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
nicotinate-nucleotide pyrophosphorylase
L3_058_000G1_scaffold_2470_4
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2437..3654)
DNA (1218bp) protein (406aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F708_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07712.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain containing protein
L3_058_000G1_scaffold_2470_5
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3670..4683)
DNA (1014bp) protein (338aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPI2_CLOSY
quinolinate synthetase A
L3_058_000G1_scaffold_2470_6
unknown

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comp(4723..4941)
DNA (219bp) protein (73aa)

This feature has no annotations

L3_058_000G1_scaffold_2470_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5026..5853)
DNA (828bp) protein (276aa)
SIS domain protein n=3 Tax=Clostridium RepID=U2DBM4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93300.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Transcriptional regulators
L3_058_000G1_scaffold_2470_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6331..7704
DNA (1374bp) protein (458aa)
Putative uncharacterized protein n=2 Tax=Clostridium RepID=E7GPI0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93299.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
sodium/glutamate symporter superfamily
L3_058_000G1_scaffold_2470_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7746..8651
DNA (906bp) protein (302aa)
glutamate formiminotransferase (EC:2.1.2.5)
Glutamate formiminotransferase n=2 Tax=Clostridium RepID=G5F704_9CLOT
Glutamate formimidoyltransferase {ECO:0000313|EMBL:ERI78869.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_058_000G1_scaffold_2470_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8689..9324
DNA (636bp) protein (212aa)
Formimidoyltetrahydrofolate cyclodeaminase (EC:4.3.1.4)
Formiminotransferase-cyclodeaminase n=3 Tax=Clostridium RepID=E9SPE4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07707.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_000G1_scaffold_2470_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9462..11363)
DNA (1902bp) protein (634aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GPH7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93296.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
PfkB domain-containing protein
L3_058_000G1_scaffold_2470_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11518..12417)
DNA (900bp) protein (300aa)
Sugar kinases, ribokinase family (EC:2.7.1.15)
Ribokinase family Sugar kinase n=2 Tax=Clostridium RepID=E7GPH6_CLOSY
Ribokinase family Sugar kinase {ECO:0000313|EMBL:EGA93295.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_000G1_scaffold_2470_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12432..13430)
DNA (999bp) protein (333aa)
Inosine-uridine nucleoside N-ribohydrolase (EC:3.2.2.1 3.2.-.-)
Inosine-uridine nucleoside N-ribohydrolase n=3 Tax=Clostridium RepID=E7GPH5_CLOSY
Inosine-uridine nucleoside N-ribohydrolase {ECO:0000313|EMBL:EGA93294.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_000G1_scaffold_2470_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13451..14377)
DNA (927bp) protein (309aa)
Branched-chain amino acid ABC transporter, permease protein n=3 Tax=Clostridium RepID=U2C489_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93293.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Uncharacterized ABC-type transport system, permease component
L3_058_000G1_scaffold_2470_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14427..15527)
DNA (1101bp) protein (367aa)
Putative uncharacterized protein n=2 Tax=Clostridium RepID=E7GPK9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07702.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ABC-type uncharacterized transport system, permease component
L3_058_000G1_scaffold_2470_16
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15524..17068)
DNA (1545bp) protein (515aa)
nucleoside ABC transporter ATP-binding protein (EC:3.6.3.17)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F6Z7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07701.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_000G1_scaffold_2470_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17151..18290)
DNA (1140bp) protein (380aa)
Basic membrane protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BL44_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93290.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
L3_058_000G1_scaffold_2470_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19025..19519)
DNA (495bp) protein (165aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Phosphodiesterase family protein n=3 Tax=Clostridium RepID=E9SPC3_CLOSY
phosphoesterase, MJ0936 family
L3_058_000G1_scaffold_2470_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19497..20120)
DNA (624bp) protein (208aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=3 Tax=Clostridium RepID=E7GPK5_CLOSY
L3_058_000G1_scaffold_2470_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20110..21834)
DNA (1725bp) protein (575aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F6Z3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07697.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
cell surface protein
L3_058_000G1_scaffold_2470_21
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21824..22990)
DNA (1167bp) protein (389aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5F6Z2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF07696.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
rRNA (guanine-N(2)-)-methyltransferase
L3_058_000G1_scaffold_2470_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23188..23496)
DNA (309bp) protein (103aa)
Rhodanese-like family protein n=3 Tax=Clostridium symbiosum RepID=E9SPB9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA93285.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Rhodanese-related sulfurtransferase
L3_058_000G1_scaffold_2470_23
unknown

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23547..23849
DNA (303bp) protein (101aa)

This feature has no annotations

L3_058_000G1_scaffold_2470_24
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24097..24810)
DNA (714bp) protein (238aa)
NlpC/P60 family protein n=2 Tax=Clostridium RepID=E9SPB7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF07693.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Cell wall-associated hydrolases (invasion-associated proteins)
Displaying 24 items

View Taxonomy