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L3_058_000G1_scaffold_3352

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_3352_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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619..1638
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=4 Tax=Clostridium RepID=U2DEN5_CLOSY
L3_058_000G1_scaffold_3352_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1714..4134
DNA (2421bp) protein (807aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
phenylalanyl-tRNA synthetase beta subunit (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GKV1_CLOSY
L3_058_000G1_scaffold_3352_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4436..9145
DNA (4710bp) protein (1570aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FHT2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF04058.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
L3_058_000G1_scaffold_3352_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9289..10557
DNA (1269bp) protein (423aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
enolase (EC:4.2.1.11)
Enolase n=3 Tax=Clostridium RepID=E7GKU8_CLOSY
L3_058_000G1_scaffold_3352_5
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10813..11826
DNA (1014bp) protein (338aa)
Isopropylmalate/homocitrate/citramalate synthases (EC:4.1.3.39)
Putative 4-hydroxy-2-oxovalerate aldolase n=2 Tax=Clostridium RepID=E9SMJ1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF04060.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_000G1_scaffold_3352_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11828..12793
DNA (966bp) protein (322aa)
Phosphoglycerate dehydrogenase and related dehydrogenases (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=2 Tax=Clostridium RepID=E7GKU6_CLOSY
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EGA94534.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_000G1_scaffold_3352_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12818..14218
DNA (1401bp) protein (467aa)
Putative sodium/glutamate symporter n=2 Tax=Clostridium symbiosum RepID=U2BP39_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94533.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Na+/glutamate symporter
L3_058_000G1_scaffold_3352_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14241..15383
DNA (1143bp) protein (381aa)
Amidohydrolase family protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C790_CLOSY
Amidohydrolase family protein {ECO:0000313|EMBL:ERI79903.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
amidohydrolase
L3_058_000G1_scaffold_3352_9
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15515..15751
DNA (237bp) protein (79aa)
Preprotein translocase, SecG subunit n=4 Tax=Clostridium RepID=E9SMI7_CLOSY
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EHF04065.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
protein translocase, SecG subunit
L3_058_000G1_scaffold_3352_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15873..18191
DNA (2319bp) protein (773aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Ribonuclease R n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FHU0_9CLOT
ribonuclease R
L3_058_000G1_scaffold_3352_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18221..18685
DNA (465bp) protein (155aa)
SsrA-binding protein n=4 Tax=Clostridium RepID=E7GKU1_CLOSY
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
SsrA-binding protein
Displaying 11 items

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