ggKbase home page

L3_058_000G1_scaffold_1132

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_1132_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(180..1406)
DNA (1227bp) protein (409aa)
Aldo/keto reductase family Oxidoreductase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GH74_CLOSY
Aldo/keto reductase family Oxidoreductase {ECO:0000313|EMBL:EGA95852.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Predicted oxidoreductases of the aldo/keto reductase family
L3_058_000G1_scaffold_1132_2
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1403..2080)
DNA (678bp) protein (226aa)
FCD domain protein n=4 Tax=Clostridium RepID=E9SJS1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95853.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
transcriptional regulator, GntR family
L3_058_000G1_scaffold_1132_3
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2101..2997)
DNA (897bp) protein (299aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=3 Tax=Clostridium RepID=E7GH76_CLOSY
L3_058_000G1_scaffold_1132_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3094..3801)
DNA (708bp) protein (236aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=U2C798_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95855.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Predicted integral membrane protein
L3_058_000G1_scaffold_1132_5
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3859..4560)
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FE15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05313.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Acetyltransferases, including N-acetylases of ribosomal proteins
L3_058_000G1_scaffold_1132_6
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4613..5131)
DNA (519bp) protein (173aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Clostridium symbiosum RepID=E7GH79_CLOSY
L3_058_000G1_scaffold_1132_7
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5203..6699)
DNA (1497bp) protein (499aa)
Transcriptional regulator, AraC family n=2 Tax=Clostridium RepID=U2DG04_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05315.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
two component transcriptional regulator, AraC family
L3_058_000G1_scaffold_1132_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6920..8248
DNA (1329bp) protein (443aa)
Transporter gate domain protein n=3 Tax=Clostridium RepID=U2DL24_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95859.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_000G1_scaffold_1132_9
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8298..8969
DNA (672bp) protein (224aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SJR4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05318.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
flavoprotein oxygenase DIM6/NTAB family-protein
L3_058_000G1_scaffold_1132_10
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9179..9985
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FE21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05319.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
alpha/beta fold family hydrolase
L3_058_000G1_scaffold_1132_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10226..11494
DNA (1269bp) protein (423aa)
Transporter, major facilitator family protein n=4 Tax=Clostridium RepID=E9SJR2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95862.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
MFS transporter
L3_058_000G1_scaffold_1132_12
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11811..13157)
DNA (1347bp) protein (449aa)
Amino acid carrier protein n=2 Tax=Clostridium RepID=E7GH85_CLOSY
Amino acid carrier protein {ECO:0000313|EMBL:EGA95863.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
amino acid carrier protein
L3_058_000G1_scaffold_1132_13
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13362..14339
DNA (978bp) protein (326aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SJR0_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05322.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_1132_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14545..15105)
DNA (561bp) protein (187aa)
Outer membrane protein H.8 n=4 Tax=Clostridium RepID=E7GH87_CLOSY
Outer membrane protein H.8 {ECO:0000313|EMBL:EGA95865.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_058_000G1_scaffold_1132_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15383..16222)
DNA (840bp) protein (280aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=U2DL15_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05324.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_1132_16
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16238..17491)
DNA (1254bp) protein (418aa)
Citrate transporter n=3 Tax=Clostridium RepID=E7GH89_CLOSY
Citrate transporter {ECO:0000313|EMBL:EGA95867.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
citrate transporter family protein
L3_058_000G1_scaffold_1132_17
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17759..18721)
DNA (963bp) protein (321aa)
4-phosphoerythronate dehydrogenase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SJQ6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05326.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Phosphoglycerate dehydrogenase and related dehydrogenases
L3_058_000G1_scaffold_1132_18
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18740..18844)
DNA (105bp) protein (35aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FE29_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05327.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_000G1_scaffold_1132_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18865..19821)
DNA (957bp) protein (319aa)
glycerate dehydrogenase (EC:1.1.1.29)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GH91_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95869.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_000G1_scaffold_1132_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19940..20641)
DNA (702bp) protein (234aa)
Demethylmenaquinone methyltransferase n=4 Tax=Clostridium RepID=E9SJQ4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95870.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
aldolase
L3_058_000G1_scaffold_1132_21
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21485..22468
DNA (984bp) protein (328aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FE32_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05330.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Transcriptional regulator
L3_058_000G1_scaffold_1132_22
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22534..24075)
DNA (1542bp) protein (514aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FE33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05331.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
L3_058_000G1_scaffold_1132_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24077..25063)
DNA (987bp) protein (329aa)
Glycosyltransferases involved in cell wall biogenesis (EC:2.4.1.83)
Glycosyltransferase, group 2 family protein n=4 Tax=Clostridium RepID=U2C8M1_CLOSY
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:ERI80373.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
L3_058_000G1_scaffold_1132_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25071..25934)
DNA (864bp) protein (288aa)
LPS biosynthesis protein (EC:2.7.8.-)
LicD2 protein n=2 Tax=Clostridium symbiosum RepID=E7GH96_CLOSY
LicD2 protein {ECO:0000313|EMBL:EGA95874.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_000G1_scaffold_1132_25
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25939..27306)
DNA (1368bp) protein (456aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein n=2 Tax=Clostridium RepID=E9SJP9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05334.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
L3_058_000G1_scaffold_1132_26
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27308..28378)
DNA (1071bp) protein (357aa)
CDP-glucose 4,6-dehydratase (EC:4.2.1.45)
CDP-glucose 4,6-dehydratase n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FE37_9CLOT
CDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:EHF05335.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_000G1_scaffold_1132_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28459..29229)
DNA (771bp) protein (257aa)
glucose-1-phosphate cytidylyltransferase (EC:2.7.7.33)
Glucose-1-phosphate cytidylyltransferase n=3 Tax=Clostridium symbiosum RepID=U2BQF1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95877.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_058_000G1_scaffold_1132_28
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29304..30749)
DNA (1446bp) protein (482aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FE39_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05337.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_1132_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30765..31697)
DNA (933bp) protein (311aa)
Glycosyltransferase, group 2 family protein n=4 Tax=Clostridium RepID=E9SJP5_CLOSY
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:ERI80367.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Glycosyltransferases involved in cell wall biogenesis
L3_058_000G1_scaffold_1132_30
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31783..33954)
DNA (2172bp) protein (724aa)
Uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SJP4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05339.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
Displaying items 1-30 of 39 in total

View Taxonomy