ggKbase home page

L3_058_000G1_scaffold_1239

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_058_000G1_scaffold_1239_1
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(593..1543)
DNA (951bp) protein (317aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FJM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03426.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_1239_2
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2069..2737
DNA (669bp) protein (223aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=4 Tax=Clostridium RepID=E9SUC3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03425.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
ATPases involved in chromosome partitioning
L3_058_000G1_scaffold_1239_3
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2851..3921
DNA (1071bp) protein (357aa)
Stage 0 sporulation protein J n=3 Tax=Clostridium RepID=E7GSE0_CLOSY
Stage 0 sporulation protein J {ECO:0000313|EMBL:EGA92283.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ParB-like partition proteins
L3_058_000G1_scaffold_1239_4
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3996..4499
DNA (504bp) protein (168aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=E9SUC5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:ERI79967.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_058_000G1_scaffold_1239_5
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4649..5542
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FJM0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03422.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_058_000G1_scaffold_1239_6
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6033..8102)
DNA (2070bp) protein (690aa)
Methyl-accepting chemotaxis protein signaling domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SUG8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03941.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
methyl-accepting chemotaxis sensory transducer with Cache sensor
L3_058_000G1_scaffold_1239_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8278..11376)
DNA (3099bp) protein (1033aa)
Diguanylate cyclase domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C608_CLOSY
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERI79960.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
signal transduction histidine kinase
L3_058_000G1_scaffold_1239_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11747..12880
DNA (1134bp) protein (378aa)
Acyl-CoA dehydrogenase, C-terminal domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SUH0_CLOSY
Putative acyl-CoA dehydrogenase {ECO:0000313|EMBL:ERI79959.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
acyl-CoA dehydrogenase
L3_058_000G1_scaffold_1239_9
unknown

Not on your lists

12912..13028
DNA (117bp) protein (39aa)

This feature has no annotations

L3_058_000G1_scaffold_1239_10
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13000..15270)
DNA (2271bp) protein (757aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Sensor protein n=4 Tax=Clostridium RepID=E7GSI8_CLOSY
Signal transduction histidine kinase
L3_058_000G1_scaffold_1239_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15486..16283
DNA (798bp) protein (266aa)
Electron transfer flavoprotein domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SUH3_CLOSY
Electron transfer flavoprotein {ECO:0000313|EMBL:ERI79956.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
Electron transfer flavoprotein alpha/beta-subunit
L3_058_000G1_scaffold_1239_12
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16304..17323
DNA (1020bp) protein (340aa)
Electron transfer flavoprotein FAD-binding domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SUH4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03975.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Electron transfer flavoprotein, alpha subunit
L3_058_000G1_scaffold_1239_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17415..18215
DNA (801bp) protein (267aa)
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SUH5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA95768.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
enoyl-CoA hydratase
L3_058_000G1_scaffold_1239_14
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18232..19530
DNA (1299bp) protein (433aa)
4-hydroxybutyrate CoA-transferase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SUH6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05305.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
4-hydroxybutyrate CoA-transferase
L3_058_000G1_scaffold_1239_15
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19550..20917
DNA (1368bp) protein (456aa)
Transporter, SSS family n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SUH7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF05308.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Na+/solute symporter
L3_058_000G1_scaffold_1239_16
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21135..22142
DNA (1008bp) protein (336aa)
Exonuclease n=5 Tax=Clostridium RepID=E7GSJ1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03948.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
Inhibitor of the KinA pathway to sporulation, predicted exonuclease
L3_058_000G1_scaffold_1239_17
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22227..22799)
DNA (573bp) protein (191aa)
TetR family regulatory protein n=4 Tax=Clostridium RepID=E7GSJ2_CLOSY
TetR family regulatory protein {ECO:0000313|EMBL:EGA92211.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
AcrR; transcriptional regulator
L3_058_000G1_scaffold_1239_18
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22894..23679
DNA (786bp) protein (262aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SUI0_CLOSY
4Fe-4S binding domain protein {ECO:0000313|EMBL:ERI79952.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_058_000G1_scaffold_1239_19
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23709..25298)
DNA (1590bp) protein (530aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SUI1_CLOSY
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:ERI79951.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
D-alanyl-D-alanine carboxypeptidase
L3_058_000G1_scaffold_1239_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25503..26195)
DNA (693bp) protein (231aa)
TIGR01906 family protein n=3 Tax=Clostridium RepID=E9SUI2_CLOSY
Integral membrane protein {ECO:0000313|EMBL:EHF03952.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
integral membrane protein TIGR01906
L3_058_000G1_scaffold_1239_21
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26462..27163
DNA (702bp) protein (234aa)
HAD hydrolase, family IA, variant 3 n=4 Tax=Clostridium RepID=U2C7D5_CLOSY
Phosphorylated carbohydrates phosphatase {ECO:0000313|EMBL:EGA92215.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
L3_058_000G1_scaffold_1239_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27374..28741)
DNA (1368bp) protein (456aa)
Transporter, SSS family n=1 Tax=Clostridium symbiosum WAL-14673 RepID=E9SUI4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92217.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Sodium:solute symporter
L3_058_000G1_scaffold_1239_23
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28868..30274)
DNA (1407bp) protein (469aa)
Transporter, SSS family n=3 Tax=Clostridium symbiosum RepID=E9SUI5_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92218.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Na+/solute symporter
L3_058_000G1_scaffold_1239_24
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30379..32328)
DNA (1950bp) protein (650aa)
enoate reductase (EC:1.3.1.31)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FI38_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03956.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
L3_058_000G1_scaffold_1239_25
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32639..33934
DNA (1296bp) protein (432aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DJT4_CLOSY
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERI79941.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
AraC family transcriptional regulator
L3_058_000G1_scaffold_1239_26
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34136..36094
DNA (1959bp) protein (653aa)
NADH oxidase n=2 Tax=Clostridium RepID=E9SUI8_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EHF03958.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
NADH:flavin oxidoreductases, Old Yellow Enzyme family
L3_058_000G1_scaffold_1239_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36375..38234
DNA (1860bp) protein (620aa)
Cadmium-translocating P-type ATPase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GSK3_CLOSY
Cadmium-translocating P-type ATPase {ECO:0000313|EMBL:EGA92222.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
heavy metal-translocating P-type ATPase
L3_058_000G1_scaffold_1239_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38264..38638
DNA (375bp) protein (125aa)
Putative uncharacterized protein n=3 Tax=Clostridium RepID=E7GSK4_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92223.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
ArsR family transcriptional regulator
L3_058_000G1_scaffold_1239_29
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38740..42492)
DNA (3753bp) protein (1251aa)
Diguanylate cyclase domain protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2DJT0_CLOSY
Diguanylate cyclase domain protein {ECO:0000313|EMBL:ERI79936.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_058_000G1_scaffold_1239_30
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(42509..43126)
DNA (618bp) protein (206aa)
H(+)-transporting ATP synthase, vacuolar type, subunit D (EC:3.6.3.14)
V-type ATP synthase subunit D n=4 Tax=Clostridium RepID=E7GSK6_CLOSY
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
Displaying items 1-30 of 45 in total

View Taxonomy